RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 HMGN3Q15651 99 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 ACTBL2Q562R1 376 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 OR4A4PQ8NGN8 299 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 OR4K15Q8NH41 348 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF714Q96N38 554 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 THAP7Q9BT49 309 aaPredicted RBP10.47□□□□□ -0.73
SCLT1-202ENST00000439369 PDZD2O15018 2839 aa10.47□□□□□ -0.73
SCLT1-202ENST00000439369 ASH1LQ9NR48 2969 aaKnown RBP10.47□□□□□ -0.73
SCLT1-202ENST00000439369 IGHV2-70DA0A0C4DH43 119 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 KBTBD11-OT1A0A1B0GTJ5 212 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 A0A1W2PQ09 198 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 C22orf46C9J442 243 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 FAM157AC9JC47 383 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 NPIPB11E5RHQ5 1161 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 M0R1W7 72 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 SPINT2O43291 252 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 MSMBP08118 114 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 CSF1P09603 554 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF728P0DKX0 622 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 RCC1P18754 421 aaPredicted RBP10.46□□□□□ -0.73
SCLT1-202ENST00000439369 ZFP36P26651 326 aaKnown RBP10.46□□□□□ -0.73
SCLT1-202ENST00000439369 IL2RGP31785 369 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 GLP1RP43220 463 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 TAS2R46P59540 309 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 MADCAM1Q13477 382 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 STEAP3Q658P3 488 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 BTNL3Q6UXE8 466 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 Q6ZPA2 131 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 TCF23Q7RTU1 214 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 FGFRL1Q8N441 504 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 TPRX1Q8N7U7 411 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 LINC01356Q8N9X3 169 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 TMEM229BQ8NBD8 167 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 BEST4Q8NFU0 473 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 OR52M1Q8NGK5 317 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 SETD6Q8TBK2 473 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 GCDHQ92947 438 aaPredicted RBP10.46□□□□□ -0.73
SCLT1-202ENST00000439369 TRIM63Q969Q1 353 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 SDHCQ99643 169 aaPredicted RBP10.46□□□□□ -0.73
SCLT1-202ENST00000439369 ST6GALNAC5Q9BVH7 336 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 TAF9BQ9HBM6 251 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 CALYQ9NYX4 217 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 ANXA10Q9UJ72 324 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 KPTNQ9Y664 436 aa10.46□□□□□ -0.73
SCLT1-202ENST00000439369 PRRC2AP48634 2157 aaKnown RBP10.46□□□□□ -0.74
SCLT1-202ENST00000439369 C17orf98A8MV24 154 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 C15orf65H3BRN8 121 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 F2RL2O00254 374 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 FABP7O15540 132 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 DLX6P56179 175 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 TAS2R19P59542 299 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 LCN2P80188 198 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 HTD2P86397 168 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 TMEM249Q2WGJ8 235 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 TRIQKQ629K1 86 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 HEPN1Q6WQI6 88 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 SPNS3Q6ZMD2 512 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 FAM216AQ8WUB2 273 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 CCDC107Q8WV48 283 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 SNAPC3Q92966 411 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 ARL11Q969Q4 196 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 GALMQ96C23 342 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 CYYR1Q96J86 154 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 CABLES2Q9BTV7 478 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 ING3Q9NXR8 418 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 KLK11Q9UBX7 282 aa10.45□□□□□ -0.74
SCLT1-202ENST00000439369 ZNF230Q9UIE0 474 aaPredicted RBP10.45□□□□□ -0.74
SCLT1-202ENST00000439369 ANKRD20A5PA0PJZ0 165 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 ZNF736B4DX44 427 aaPredicted RBP10.44□□□□□ -0.74
SCLT1-202ENST00000439369 J3QLI3 93 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 HBZP02008 142 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 IL7P13232 177 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 FPR2P25090 351 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 GDNFP39905 211 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 DVL1P1P54792 670 aaPredicted RBP10.44□□□□□ -0.74
SCLT1-202ENST00000439369 ARPC4P59998 168 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 ZNF273Q14593 569 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 C17orf58Q2M2W7 97 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 Q3ZCU0 254 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 CHRFAM7AQ494W8 412 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 LY6G6FQ5SQ64 297 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 VAX1Q5SQQ9 334 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 OR52W1Q6IF63 320 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 GVQW1Q8N7I0 195 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 OR5AP2Q8NGF4 316 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 BORCS5Q969J3 196 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 COX4I2Q96KJ9 171 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 UNKLQ9H9P5 680 aaKnown RBP10.44□□□□□ -0.74
SCLT1-202ENST00000439369 PALMDQ9NP74 551 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 NECAP2Q9NVZ3 263 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 JPT1Q9UK76 154 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 INSIG2Q9Y5U4 225 aa10.44□□□□□ -0.74
SCLT1-202ENST00000439369 ITPR2Q14571 2701 aa10.43□□□□□ -0.74
SCLT1-202ENST00000439369 MEIS3P1A6NDR6 274 aa10.43□□□□□ -0.74
SCLT1-202ENST00000439369 UPK1BO75841 260 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms