RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ACER2Q5QJU3 275 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 HS3ST6Q96QI5 342 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 LINC00470Q9BZP3 86 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 MAGT1Q9H0U3 335 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 KIAA1456Q9P272 454 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 LOC400499M0QZD8 3231 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 KIR2DS1A0A191URI9 304 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 RBFOX3A6NFN3 312 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 CDRT15L2A8MXV6 281 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 HSPA12AO43301 675 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 TMEM50AO95807 157 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 IGHV3-9P01782 118 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 VDAC1P21796 283 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 OMGP23515 440 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 KIR2DS4P43632 304 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 HAAOP46952 286 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 ARF1P84077 181 aaKnown RBP14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 KIR2DS1Q14954 304 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 ZFP62Q8NB50 900 aaPredicted RBP14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 OR5C1Q8NGR4 320 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 NANPQ8TBE9 248 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 IL22RA2Q969J5 263 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 NOSIPQ9Y314 301 aaKnown RBP14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 DCHS1Q96JQ0 3298 aa14.02□□□□□ -0.16
CLCNKA-203ENST00000439316 TNRC6AQ8NDV7 1962 aaKnown RBP14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 IGKV1-6A0A0C4DH72 117 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 GPM6AP51674 278 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 DYNLT3P51808 116 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 FABP9Q0Z7S8 132 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 CEACAM21Q3KPI0 293 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 SLC16A13Q7RTY0 426 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 ZDHHC23Q8IYP9 409 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 OR5D13Q8NGL4 314 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 GNPNAT1Q96EK6 184 aaPredicted RBP14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 THOC3Q96J01 351 aaKnown RBP14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 ASCL3Q9NQ33 180 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 IL36RNQ9UBH0 155 aa14.02□□□□□ -0.17
CLCNKA-203ENST00000439316 CFAP47Q6ZTR5 3102 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 H0Y980 276 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 MRPL33O75394 65 aaKnown RBP14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 S100A9P06702 114 aaKnown RBP14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 CTXN2P0C2S0 81 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 CD82P27701 267 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 TSC22D1Q15714 1073 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 C1QL4Q86Z23 238 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 PSMF1Q92530 271 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 GPHA2Q96T91 129 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF251Q9BRH9 671 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 TCEAL7Q9BRU2 100 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 UNKLQ9H9P5 680 aaKnown RBP14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 CCL28Q9NRJ3 127 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 MTCH1Q9NZJ7 389 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 ATP23Q9Y6H3 246 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 AKAP13Q12802 2813 aa14.01□□□□□ -0.17
CLCNKA-203ENST00000439316 HSD17B6O14756 317 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 SS18L1O75177 396 aaPredicted RBP14□□□□□ -0.17
CLCNKA-203ENST00000439316 SLC34A2O95436 690 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 OR8U8P0C7N1 319 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 COX5BP10606 129 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 EPHA1P21709 976 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 MRPL21Q7Z2W9 205 aaKnown RBP14□□□□□ -0.17
CLCNKA-203ENST00000439316 HIPK2Q9H2X6 1198 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 PUS1Q9Y606 427 aaKnown RBP eCLIP14□□□□□ -0.17
CLCNKA-203ENST00000439316 CST7O76096 145 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 SRP19P09132 144 aaKnown RBP14□□□□□ -0.17
CLCNKA-203ENST00000439316 CYB561P49447 251 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 DCAF10Q5QP82 559 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 ADAM5Q6NVV9 412 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 GTF3AQ92664 365 aaKnown RBP14□□□□□ -0.17
CLCNKA-203ENST00000439316 DLL3Q9NYJ7 618 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 RNF115Q9Y4L5 304 aa14□□□□□ -0.17
CLCNKA-203ENST00000439316 TRAPPC2LH3BP13 241 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 LINC01387J3KSC0 135 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 OR2C1O95371 312 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 RNPS1Q15287 305 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 OR8G1Q15617 311 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 ZNF506Q5JVG8 444 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 HEPN1Q6WQI6 88 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 TMPRSS7Q7RTY8 843 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 MKXQ8IYA7 352 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 CMTM1Q8IZ96 169 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 MRPL30Q8TCC3 161 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 APOBEC3DQ96AK3 386 aaPredicted RBP13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 MUCL1Q96DR8 90 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 TAAR3PQ9P1P4 343 aa13.99□□□□□ -0.17
CLCNKA-203ENST00000439316 A0A096LPE4 126 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 TRBV6-6A0A0A6YYG2 114 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 A0A1W2PPZ6 126 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 C5orf49A4QMS7 147 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 H3BQ15 152 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 AP4M1O00189 453 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 HSPB6O14558 160 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 CHST1O43916 411 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 PGLYRP1O75594 196 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 HLA-HP01893 362 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 CCNOP22674 350 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 ITGA3P26006 1051 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 PAX9P55771 341 aa13.98□□□□□ -0.17
CLCNKA-203ENST00000439316 OR2B8PP59922 312 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms