RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 APCSP02743 223 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 ZXDAP98168 799 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 CEACAM16Q2WEN9 425 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 MRPL54Q6P161 138 aaKnown RBP13.17□□□□□ -0.3
TSC2-206ENST00000439117 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
TSC2-206ENST00000439117 OR4A4PQ8NGN8 299 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 ADAMTS17Q8TE56 1095 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 PARP14Q460N5 1801 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 TRGV8A0A0C4DH27 118 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
TSC2-206ENST00000439117 A8MXK9 166 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 OR2A4O95047 310 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 HAND1O96004 215 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 CCL4P13236 92 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 SPATA45Q537H7 98 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 TSPO2Q5TGU0 170 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 BOD1Q96IK1 185 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 ALKBH3Q96Q83 286 aaPredicted RBP13.17□□□□□ -0.3
TSC2-206ENST00000439117 OR2A7Q96R45 310 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 NGFP01138 241 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 FOXB1Q99853 325 aa13.17□□□□□ -0.3
TSC2-206ENST00000439117 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
TSC2-206ENST00000439117 SMPD2O60906 423 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 CSN3P07498 182 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 SMIM17P0DL12 118 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 C16orf47Q6ZP98 133 aaPredicted RBP13.16□□□□□ -0.3
TSC2-206ENST00000439117 LYZL2Q7Z4W2 148 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
TSC2-206ENST00000439117 CBLN4Q9NTU7 201 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 AQP10Q96PS8 301 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 OR2V2Q96R30 315 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 OR6C3Q9NZP0 311 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 A0A1B0GU03 582 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 PPYP01298 95 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 FABP2P12104 132 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 RPL11P62913 178 aaKnown RBP13.16□□□□□ -0.3
TSC2-206ENST00000439117 UBE2L3P68036 154 aaKnown RBP13.16□□□□□ -0.3
TSC2-206ENST00000439117 GABRA6Q16445 453 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 VAX1Q5SQQ9 334 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 OR4F17Q8NGA8 305 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 C10orf35Q96D05 121 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 OR4C12Q96R67 309 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
TSC2-206ENST00000439117 PSMB2P49721 201 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 ASB5Q8WWX0 329 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 SLC52A3Q9NQ40 469 aa13.16□□□□□ -0.3
TSC2-206ENST00000439117 HELTA6NFD8 242 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 OR2T8A6NH00 312 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 LINC00587B1AMM8 73 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 GNB1P62873 340 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 TRAT1Q6PIZ9 186 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 P2RX4Q99571 388 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 TRDCB7Z8K6 153 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 TMIGD3P0DMS9 266 aaPredicted RBP13.15□□□□□ -0.3
TSC2-206ENST00000439117 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
TSC2-206ENST00000439117 S100A4P26447 101 aaKnown RBP13.15□□□□□ -0.3
TSC2-206ENST00000439117 RIGQ13278 110 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 ADAT3Q96EY9 351 aaPredicted RBP13.15□□□□□ -0.3
TSC2-206ENST00000439117 ICAM5Q9UMF0 924 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 WIPI2Q9Y4P8 454 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 MMP9P14780 707 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 AGFG1P52594 562 aaKnown RBP13.15□□□□□ -0.3
TSC2-206ENST00000439117 HOGA1Q86XE5 327 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 TMEM116Q8NCL8 245 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 CT55Q8WUE5 264 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 SIPA1L1O43166 1804 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 A0A0B4J293 547 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 FCGR3BO75015 233 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 VSIG8P0DPA2 414 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 PDCD1Q15116 288 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 WFDC8Q8IUA0 241 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 PTPMT1Q8WUK0 201 aaPredicted RBP13.15□□□□□ -0.3
TSC2-206ENST00000439117 TMEM204Q9BSN7 226 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 GPR27Q9NS67 375 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 TUBD1Q9UJT1 453 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 ATP23Q9Y6H3 246 aa13.15□□□□□ -0.3
TSC2-206ENST00000439117 NKX2-6A6NCS4 301 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 VMA21Q3ZAQ7 101 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 SCGB1D4Q6XE38 83 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 IGHV5-10-1A0A0J9YXX1 117 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 A0A1B0GV72 72 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 SP1P08047 785 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 MEOX1P50221 254 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 CBLN3Q6UW01 205 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 GFRALQ6UXV0 394 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 ARL6IP6Q8N6S5 226 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 OR5AC2Q9NZP5 309 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
TSC2-206ENST00000439117 CYR61O00622 381 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms