RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ELF3P78545 371 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 LCN2P80188 198 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 BASP1P80723 227 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 ACVR1Q04771 509 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 ADIGQ0VDE8 80 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 FADDQ13158 208 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 STX3Q13277 289 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 ARFRP1Q13795 201 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 MOBPQ13875 183 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRPSAP1Q14558 356 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 MAPRE2Q15555 327 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 PARP15Q460N3 678 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 CCDC153Q494R4 210 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 VPS26BQ4G0F5 336 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 C22orf42Q6IC83 251 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 UTS2BQ765I0 119 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC16A14Q7RTX9 510 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 PID1Q7Z2X4 250 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM122BQ7Z309 247 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 NUDCD3Q8IVD9 361 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC35F2Q8IXU6 374 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 C10orf67Q8IYJ2 551 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC38A6Q8IZM9 456 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SYS1Q8N2H4 156 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 LRRC75AQ8NAA5 344 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 B3GNT7Q8NFL0 401 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2T33Q8NG76 320 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2M7Q8NG81 312 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR5L2Q8NGL0 311 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR4A4PQ8NGN8 299 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR1L6Q8NGR2 347 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 CNIH3Q8TBE1 160 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 C10orf82Q8WW14 230 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 DYDC1Q8WWB3 177 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 CCDC124Q96CT7 223 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 IMP4Q96G21 291 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SEC22AQ96IW7 307 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 PLEKHA8Q96JA3 519 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 BTN2A3PQ96KV6 586 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SERPINB11Q96P15 392 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 TSSK3Q96PN8 268 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 CNN2Q99439 309 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 GPR22Q99680 433 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SELENOSQ9BQE4 189 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 ROGDIQ9GZN7 287 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 MFFQ9GZY8 342 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 ALX4Q9H161 411 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 NXF5Q9H1B4 397 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2AG1Q9H205 316 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 GBA3Q9H227 469 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 RHOJQ9H4E5 214 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM96AQ9H5X1 160 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 POPDC3Q9HBV1 291 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC40A1Q9NP59 571 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC17A5Q9NRA2 495 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM49BQ9NUQ9 324 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 FGFR1OP2Q9NVK5 253 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 DDIT4Q9NX09 232 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 B3GNT2Q9NY97 397 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 IL36GQ9NZH8 169 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 BFARQ9NZS9 450 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 EMC3Q9P0I2 261 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 MYEF2Q9P2K5 600 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 WARS2Q9UGM6 360 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 RIMS3Q9UJD0 308 aa1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 SNRNP200O75643 2136 aaKnown RBP1.42□□□□□ -2.18
HMGB1P18-201ENST00000438801 A0A0A6YYH2 397 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 C1orf232A0A0U1RR37 186 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 A6NDX4 124 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 A6NJ64 397 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SMIM23A6NLE4 172 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TRPC5OSA6NMA1 111 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CENPXA8MT69 81 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGLL5B9A064 214 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 H3BMQ9 156 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 GOLGA8RI6L899 631 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 M0R3G1 203 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 KCNK1O00180 336 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SIVA1O15304 175 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CXCL13O43927 109 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRKYO43930 277 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MFSD11O43934 449 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 GMDSO60547 372 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 UGT1A9O60656 530 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SPAG7O75391 227 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CLDN11O75508 207 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 BANF1O75531 89 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MED6O75586 246 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZMPSTE24O75844 475 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 FARS2O95363 451 aaKnown RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CST4P01036 141 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGHV3-48P01763 117 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SERPINE1P05121 402 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 KLK1P06870 262 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 RBP1P09455 135 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CT62P0C5K7 136 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SMIM10L1P0DMW3 83 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR12D1P0DN82 309 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MYL2P10916 166 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 IGFBP3P17936 291 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms