RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MEOX2P50222 304 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 UCP2P55851 309 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 CEACAM21Q3KPI0 293 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 UNQ6494/PRO21346Q6UXR6 183 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 FAM185AQ8N0U4 392 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 RND1Q92730 232 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 TMEM45BQ96B21 275 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
TRAPPC9-202ENST00000438773 TRAV39A0A0B4J263 110 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 GPR37O15354 613 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 CLDN18P56856 261 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 MPV17LQ2QL34 196 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR10S1Q8NGN2 331 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 ASB13Q8WXK3 278 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 PRDM14Q9GZV8 571 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF716A6NP11 495 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 IFNA1P01562 189 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 RBM11P57052 281 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 PRSS33Q8NF86 280 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 MALSU1Q96EH3 234 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 TVP23CQ96ET8 276 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 EML5Q05BV3 1969 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 FAM208BQ5VWN6 2430 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 DHRS7CA6NNS2 312 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 TMEM14DPA8MWL7 114 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 NDUFA2O43678 99 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 HBG1P69891 147 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 HBG2P69892 147 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF266Q14584 549 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 KRTCAP3Q53RY4 240 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 CLEC18BQ6UXF7 455 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 H2BFWTQ7Z2G1 175 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 HOGA1Q86XE5 327 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZIC4Q8N9L1 334 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR4A16Q8NH70 328 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 PIK3IP1Q96FE7 263 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 MIOXQ9UGB7 285 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 KPTNQ9Y664 436 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 NCOR2Q9Y618 2525 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 SYNGR3O43761 229 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 DTYMKP23919 212 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 TNFAIP6P98066 277 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 MPPED2Q15777 294 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 C1orf185Q5T7R7 199 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 ABLIM2Q6H8Q1 611 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 MOB1BQ7L9L4 216 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 SLC25A42Q86VD7 318 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 PUSL1Q8N0Z8 303 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 ADAD2Q8NCV1 583 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR5M8Q8NGP6 311 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 RAB18Q9NP72 206 aa9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 HEYLQ9NQ87 328 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 LIN7CQ9NUP9 197 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR5AC1P0C628 307 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 IAPPP10997 89 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 FABP4P15090 132 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 CEACAM6P40199 344 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 LY6G6FQ5SQ64 297 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 FAHD2BQ6P2I3 314 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 FAHD2AQ96GK7 314 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 SLC39A9Q9NUM3 307 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF319Q9P2F9 582 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 ACACBO00763 2458 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 E5RGE8 158 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 C16orf97H3BN30 126 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 C1QL1O75973 258 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 COX5BP10606 129 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 RCC1P18754 421 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZBTB25P24278 435 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 ACKR3P25106 362 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 SNCAP37840 140 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR3A1P47881 315 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 PJVKQ0ZLH3 352 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 RAB31Q13636 194 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 C1QL2Q7Z5L3 287 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 GGNQ86UU5 652 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 OR10V1Q8NGI7 309 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 NSG2Q9Y328 171 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 FER1L5A0AVI2 2057 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 CDRT15L2A8MXV6 281 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 F2RL1P55085 397 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 RPP30P78346 268 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 H3F3AP84243 136 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 PRAMEF6Q5VXH4 476 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 THNSL2Q86YJ6 484 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 VSIG4Q9Y279 399 aa9.98□□□□□ -0.81
TRAPPC9-202ENST00000438773 ENSAO43768 121 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 AADACP22760 399 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 UNC119Q13432 240 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 GUK1Q16774 197 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 MRGPRDQ8TDS7 321 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 NAA60Q9H7X0 242 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 UQCC1Q9NVA1 299 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 LAMA1P25391 3075 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 A0A1W2PPE2 198 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 LOC390937A0A1W2PQ73 354 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms