RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 BPIFB3P59826 476 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 LTC4SQ16873 150 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 CLVS1Q8IUQ0 354 aaPredicted RBP13.17□□□□□ -0.3
SNRPB-202ENST00000438552 GAPTQ8N292 157 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 SIGLECL1Q8N7X8 197 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 ZNF565Q8N9K5 539 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 OR5H6Q8NGV6 325 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 NDNFQ8TB73 568 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 MRPL30Q8TCC3 161 aaKnown RBP13.17□□□□□ -0.3
SNRPB-202ENST00000438552 ZNF418Q8TF45 676 aaPredicted RBP13.17□□□□□ -0.3
SNRPB-202ENST00000438552 PTX4Q96A99 478 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 PECRQ9BY49 303 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 ATG5Q9H1Y0 275 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 TRAPPC2LQ9UL33 140 aa13.17□□□□□ -0.3
SNRPB-202ENST00000438552 DPPA5A6NC42 116 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 CA11O75493 328 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 NFYBP25208 207 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 UTF1Q5T230 341 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 OR13D1Q8NGV5 346 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 OR10R2Q8NGX6 335 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 RFESDQ8TAC1 157 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 SLC25A46Q96AG3 418 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 SLC25A38Q96DW6 304 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 KIRREL1Q96J84 757 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 HDHD3Q9BSH5 251 aaPredicted RBP13.16□□□□□ -0.3
SNRPB-202ENST00000438552 TMEM133Q9H2Q1 129 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 IDI2-AS1Q9NZ38 188 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 HSF4Q9ULV5 492 aa13.16□□□□□ -0.3
SNRPB-202ENST00000438552 A0A075B6Q4 140 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 IGHV2-26A0A0B4J1V2 119 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 MEIOCA2RUB1 952 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 ODF3BA8MYP8 253 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 C12orf77C9JDV5 145 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 C15orf65H3BRN8 121 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 TCF21O43680 179 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 ARG1P05089 322 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
SNRPB-202ENST00000438552 DYNC1I2Q13409 638 aaKnown RBP13.15□□□□□ -0.3
SNRPB-202ENST00000438552 Q6ZPA2 131 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 Q6ZTK2 550 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 CROCCP3Q8IVE0 287 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 LEAP2Q969E1 77 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 ARL11Q969Q4 196 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 RAB3CQ96E17 227 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 RBM38Q9H0Z9 239 aaKnown RBP13.15□□□□□ -0.3
SNRPB-202ENST00000438552 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 CHMP1AQ9HD42 196 aaPredicted RBP13.15□□□□□ -0.3
SNRPB-202ENST00000438552 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 ETV7Q9Y603 341 aa13.15□□□□□ -0.3
SNRPB-202ENST00000438552 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 RAB27BO00194 218 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 VENTXO95231 258 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 NAPSAO96009 420 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 GNB3P16520 340 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 SCAND1P57086 179 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 MIDNQ504T8 468 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 C6orf183Q5T699 404 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 ZNF626Q68DY1 528 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 OR52W1Q6IF63 320 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 USP43Q70EL4 1123 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 C5orf24Q7Z6I8 188 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 CLEC7AQ9BXN2 247 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 LINC00574Q9H8X3 128 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 ESM1Q9NQ30 184 aa13.14□□□□□ -0.31
SNRPB-202ENST00000438552 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
SNRPB-202ENST00000438552 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 MFNGO00587 321 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 ORC5O43913 435 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 IGHV3-7P01780 117 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 HIST1H1DP16402 221 aaKnown RBP13.13□□□□□ -0.31
SNRPB-202ENST00000438552 GZMHP20718 246 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 PAX6P26367 422 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 HILS1P60008 231 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 SPCS2Q15005 226 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 RBMS3Q6XE24 437 aaKnown RBP13.13□□□□□ -0.31
SNRPB-202ENST00000438552 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 ABHD12Q8N2K0 398 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 OR11H6Q8NGC7 330 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 OR1L1Q8NH94 360 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 SETD6Q8TBK2 473 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 RAB2BQ8WUD1 216 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 BCL7BQ9BQE9 202 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 ZMAT3Q9HA38 289 aaKnown RBP13.13□□□□□ -0.31
SNRPB-202ENST00000438552 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 ABRACLQ9P1F3 81 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 ZNRD1Q9P1U0 126 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 SPATA2Q9UM82 520 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 KCNK7Q9Y2U2 307 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms