RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CCRL2O00421 344 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 DYNC1I1O14576 645 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 ZFPL1O95159 310 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 HTR3BO95264 441 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 GAPDHP04406 335 aaKnown RBP6.15□□□□□ -1.42
VPS50-204ENST00000438395 AMY1AP04745 511 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 AMY2AP04746 511 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 SSTR5P35346 364 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 MYCNOSP40205 109 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 SOX2P48431 317 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 ALDH3A2P51648 485 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 DGCR2P98153 550 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 CDK5R1Q15078 307 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 C17orf58Q2M2W7 97 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 PIGYQ3MUY2 71 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 CXorf66Q5JRM2 361 aaPredicted RBP6.15□□□□□ -1.42
VPS50-204ENST00000438395 SLC25A30Q5SVS4 291 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 ELP2Q6IA86 826 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 ZFP1Q6P2D0 407 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 Q6P435 159 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 SLC16A12Q6ZSM3 486 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 LHFPL3Q86UP9 236 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 ZNF695Q8IW36 515 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 C10orf67Q8IYJ2 551 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 PARP16Q8N5Y8 322 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 C5orf56Q8N8D9 126 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 PXT1Q8NFP0 134 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 OR10A7Q8NGE5 316 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 GPR148Q8TDV2 347 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 PYDC1Q8WXC3 89 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 LGALS12Q96DT0 336 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 NOL4LQ96MY1 436 aaPredicted RBP6.15□□□□□ -1.42
VPS50-204ENST00000438395 PDCD1LG2Q9BQ51 273 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 DPCDQ9BVM2 203 aaPredicted RBP6.15□□□□□ -1.42
VPS50-204ENST00000438395 NCOR1P1Q9H4R4 102 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 CKLFQ9UBR5 152 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 PSG11Q9UQ72 335 aa6.15□□□□□ -1.42
VPS50-204ENST00000438395 STAB2Q8WWQ8 2551 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 TRAV24A0A0B4J272 114 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 A0A1W2PPI3 338 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 SDCBPO00560 298 aaPredicted RBP6.14□□□□□ -1.43
VPS50-204ENST00000438395 GABRPO00591 440 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 SPINT2O43291 252 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 MYL12AP19105 171 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 GZMHP20718 246 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 REG1BP48304 166 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 THBS3P49746 956 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 ZP1P60852 638 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 EGFEM1PQ0D2K5 195 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 RAB40BQ12829 278 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 MED21Q13503 144 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 ATAD3CQ5T2N8 411 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 DDI2Q5TDH0 399 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 C11orf87Q6NUJ2 197 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 TEX38Q6PEX7 206 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 TMPRSS11AQ6ZMR5 421 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 RNF144BQ7Z419 303 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 CBR4Q8N4T8 237 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 OR10K1Q8NGX5 313 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 OR2T10Q8NGZ9 312 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 OR8U1Q8NH10 309 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 ARL11Q969Q4 196 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 RASL11BQ9BPW5 248 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 JAM3Q9BX67 310 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 METTL9Q9H1A3 318 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 ISG20L2Q9H9L3 353 aaKnown RBP6.14□□□□□ -1.43
VPS50-204ENST00000438395 ERVK13-1Q9NX77 482 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 TAS2R4Q9NYW5 299 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 GNG12Q9UBI6 72 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 LINC00527Q9UJ94 153 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 ING4Q9UNL4 249 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 ST3GAL6Q9Y274 331 aa6.14□□□□□ -1.43
VPS50-204ENST00000438395 EXOGQ9Y2C4 368 aaKnown RBP6.14□□□□□ -1.43
VPS50-204ENST00000438395 RPL36Q9Y3U8 105 aaKnown RBP6.14□□□□□ -1.43
VPS50-204ENST00000438395 IGHV3-72A0A0B4J1Y9 119 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 TRAV39A0A0B4J263 110 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 A0A1W2PPE3 182 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 NPIPB11E5RHQ5 1161 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 J3QRE1 110 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 AIPO00170 330 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 CCL24O00175 119 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 TXNL1O43396 289 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 RAMP3O60896 148 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 ZNF780AO75290 641 aaPredicted RBP6.13□□□□□ -1.43
VPS50-204ENST00000438395 CDRT1O95170 752 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 IGHG2P01859 326 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 OR5H8P0DN80 308 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 GTF2F2P13984 249 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 SERPINA2P20848 420 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 VDAC1P21796 283 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 ZNF93P35789 620 aaPredicted RBP6.13□□□□□ -1.43
VPS50-204ENST00000438395 GPR12P47775 334 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 RBM11P57052 281 aaKnown RBP6.13□□□□□ -1.43
VPS50-204ENST00000438395 KRTAP10-11P60412 298 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 PAX5Q02548 391 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 PNLIPRP3Q17RR3 467 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 SLC22A6Q4U2R8 563 aa6.13□□□□□ -1.43
VPS50-204ENST00000438395 KLHL22Q53GT1 634 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms