RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 MSL2Q9HCI7 577 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 FCGR3BO75015 233 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 SRSF10O75494 262 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF83P51522 516 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 STARD6P59095 220 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 HTD2P86397 168 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 SLC38A11Q08AI6 406 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 DNASE2BQ8WZ79 361 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 H0YL77 283 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 CRYAAP02489 173 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 SURF2Q15527 256 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 HES3Q5TGS1 186 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 SELENOHQ8IZQ5 122 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 C15orf54Q8N8G6 183 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 OR13D1Q8NGV5 346 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 HIPK2Q9H2X6 1198 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 WDR54Q9H977 334 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 LAMP3Q9UQV4 416 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF737O75373 536 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 UBALD2Q8IYN6 164 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 OR52L2PQ8NGH6 319 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 SAT2Q96F10 170 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 ATP5SQ99766 215 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 SLX1AQ9BQ83 275 aa10.05□□□□□ -0.8
PDLIM5-206ENST00000437932 OR5H1A6NKK0 313 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 EIF2S3P41091 472 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF343Q6P1L6 599 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 FAM185AQ8N0U4 392 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 OR10P1Q8NGE3 313 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 TAAR3PQ9P1P4 343 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF391Q9UJN7 358 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 LOC390937A0A1W2PQ73 354 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 SYNGR3O43761 229 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 NDUFB7P17568 137 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 RAB5AP20339 215 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 KIF26BQ2KJY2 2108 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 CPEB3Q8NE35 698 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 ASXL3Q9C0F0 2248 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 IGKV1-27A0A075B6S5 117 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 PRF1P14222 555 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 NCR3LG1Q68D85 454 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 POLDIP2Q9Y2S7 368 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 CABIN1Q9Y6J0 2220 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 UNC80Q8N2C7 3258 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 RHBDL1O75783 438 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 MT-CO3P00414 261 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF17P17021 662 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 C9orf152Q5JTZ5 239 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 PATZ1Q9HBE1 687 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-206ENST00000437932 MPDZO75970 2070 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 CHRNA7P36544 502 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 SNCAP37840 140 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 RPP30P78346 268 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 CSRP2Q16527 193 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF610Q8N9Z0 462 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 SLC25A40Q8TBP6 338 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 TMPRSS5Q9H3S3 457 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 IFT22Q9H7X7 185 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 PNRC2Q9NPJ4 139 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 LTBP2Q14767 1821 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 MAP1LC3B2A6NCE7 125 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 PROB1E7EW31 1015 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 LDLRAD4O15165 306 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 SUPT4H1P63272 117 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 FADS6Q8N9I5 356 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 MAP1LC3BQ9GZQ8 125 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 TOLLIPQ9H0E2 274 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 WIPF3A6NGB9 483 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 DVL1O14640 695 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 DTYMKP23919 212 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 FOXG1P55316 489 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 ZNF98A6NK75 572 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 F6UZH7 168 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 FGF5P12034 268 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 TRA2AQ13595 282 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 FAM166AQ6J272 317 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 USB1Q9BQ65 265 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 DEPPQ9NTK1 212 aa10.03□□□□□ -0.8
PDLIM5-206ENST00000437932 PHF3Q92576 2039 aaKnown RBP10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 IGSF23A1L1A6 192 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 HAND1O96004 215 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 TMEM211Q6ICI0 200 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 KCNIP4Q6PIL6 250 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 LINC00518Q8N0U6 118 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 DEFB124Q8NES8 71 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 ABHD5Q8WTS1 349 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 TMEM37Q8WXS4 190 aa10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.8
PDLIM5-206ENST00000437932 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-206ENST00000437932 PLGLAQ15195 96 aa10.02□□□□□ -0.81
PDLIM5-206ENST00000437932 TMEM105Q8N8V8 129 aa10.02□□□□□ -0.81
PDLIM5-206ENST00000437932 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms