RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CR1LQ2VPA4 569 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 DEFB113Q30KQ7 82 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 LRRC75A-AS1Q8N1F1 130 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 ZNF565Q8N9K5 539 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 OR13A1Q8NGR1 328 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 MRGPRDQ8TDS7 321 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 NECAP2Q9NVZ3 263 aa19.07■□□□□ 0.64
CPSF4-204ENST00000436336 ANKRD17O75179 2603 aaKnown RBP19.06■□□□□ 0.64
CPSF4-204ENST00000436336 DISC1C4P0D8 188 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 F5H0A9 414 aaPredicted RBP19.06■□□□□ 0.64
CPSF4-204ENST00000436336 AMY2AP04746 511 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 SCTP09683 121 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 BTCP35070 178 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 RFX2P48378 723 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 NPY4RP50391 375 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 MEF2CQ06413 473 aaPredicted RBP19.06■□□□□ 0.64
CPSF4-204ENST00000436336 OVCH2Q7RTZ1 564 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 OR4A4PQ8NGN8 299 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 NINJ1Q92982 152 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 NARFLQ9H6Q4 476 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 TAF9BQ9HBM6 251 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 CENPEQ02224 2701 aa19.06■□□□□ 0.64
CPSF4-204ENST00000436336 IFNA6P05013 189 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 ZNF735P0CB33 412 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 GZMHP20718 246 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 GLP1RP43220 463 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 ZNF782Q6ZMW2 699 aaPredicted RBP19.05■□□□□ 0.64
CPSF4-204ENST00000436336 ARRDC1Q8N5I2 433 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 OR56B4Q8NH76 319 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 MBD6Q96DN6 1003 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 EHFQ9NZC4 300 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 LPAR3Q9UBY5 353 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 CLN8Q9UBY8 286 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 OPN4Q9UHM6 478 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 TRGV10A0A0A0MS01 117 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 hADV38S2A0JD32 116 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 VWC2LB2RUY7 222 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 CTXN2P0C2S0 81 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 SLC6A1P30531 599 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 NRARPQ7Z6K4 114 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 ENKURQ8TC29 256 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 H1FXQ92522 213 aaKnown RBP19.05■□□□□ 0.64
CPSF4-204ENST00000436336 CORO2AQ92828 525 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 DCTN5Q9BTE1 182 aa19.05■□□□□ 0.64
CPSF4-204ENST00000436336 FAM240BA0A1B0GVZ2 78 aa19.04■□□□□ 0.64
CPSF4-204ENST00000436336 C12orf77C9JDV5 145 aa19.04■□□□□ 0.64
CPSF4-204ENST00000436336 SEC61A1P61619 476 aaKnown RBP19.04■□□□□ 0.64
CPSF4-204ENST00000436336 RPL31P62899 125 aaKnown RBP19.04■□□□□ 0.64
CPSF4-204ENST00000436336 WDR25Q64LD2 544 aaPredicted RBP19.04■□□□□ 0.64
CPSF4-204ENST00000436336 C5orf24Q7Z6I8 188 aa19.04■□□□□ 0.64
CPSF4-204ENST00000436336 OR51S1Q8NGJ8 323 aa19.04■□□□□ 0.64
CPSF4-204ENST00000436336 SLC6A7Q99884 636 aa19.04■□□□□ 0.64
CPSF4-204ENST00000436336 TRBV23-1A0A0A0MS06 115 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 SDCBPO00560 298 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-204ENST00000436336 IGSF11Q5DX21 431 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 TMEM17Q86X19 198 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 MINDY2Q8NBR6 621 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 CHPT1Q8WUD6 406 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 PRRT1Q99946 306 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 CABLES2Q9BTV7 478 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 DPAGT1Q9H3H5 408 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 C19orf12Q9NSK7 152 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 SLC2A8Q9NY64 477 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 SCP2D1Q9UJQ7 156 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 UBE2J1Q9Y385 318 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-204ENST00000436336 LINC00312Q9Y6C7 94 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 NBPF19A0A087WUL8 3843 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 DIRAS3O95661 229 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 IGHV2-5P01817 119 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 OR5H8P0DN80 308 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 TSPAN5P62079 268 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 GNB2P62879 340 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 HERPUD1Q15011 391 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 OXA1LQ15070 435 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 TCF23Q7RTU1 214 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 PRR18Q8N4B5 295 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 KIRREL1Q96J84 757 aa19.03■□□□□ 0.64
CPSF4-204ENST00000436336 YLPM1P49750 1951 aaKnown RBP19.02■□□□□ 0.64
CPSF4-204ENST00000436336 IGKV1-6A0A0C4DH72 117 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 C15orf65H3BRN8 121 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 CGB3P0DN86 165 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 CGB7P0DN87 165 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 SSTR5P35346 364 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 CCR6P51684 374 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 TRIM16LQ309B1 348 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 DUSP18Q8NEJ0 188 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 CLDND2Q8NHS1 167 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 ARL11Q969Q4 196 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 GALMQ96C23 342 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 SSBP3Q9BWW4 388 aaPredicted RBP19.02■□□□□ 0.63
CPSF4-204ENST00000436336 RAB9BQ9NP90 201 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 COPZ2Q9P299 210 aa19.02■□□□□ 0.63
CPSF4-204ENST00000436336 MEX3AA1L020 520 aaKnown RBP19.01■□□□□ 0.63
CPSF4-204ENST00000436336 ZNF729A6NN14 1252 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-204ENST00000436336 SPINT2O43291 252 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 HBZP02008 142 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 CLEC12BQ2HXU8 276 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 C11orf91Q3C1V1 193 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 SCGB2B2Q4G0G5 96 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 PLA1AQ53H76 456 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms