RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 OR10K1Q8NGX5 313 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RFESDQ8TAC1 157 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MYOZ3Q8TDC0 251 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TNFAIP8L1Q8WVP5 186 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ERVK13-1Q9NX77 482 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 AASSQ9UDR5 926 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 DHDHQ9UQ10 334 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 U3KQK5 164 aa8.58□□□□□ -1.04
SPTLC1P4-201ENST00000435997 IGHV3-72A0A0B4J1Y9 119 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TRAV39A0A0B4J263 110 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 A0A1W2PPE3 182 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 H3BNX3 289 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 CCRL2O00421 344 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MPZL2O60487 215 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 IGHG4P01861 327 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GAPDHP04406 335 aaKnown RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ELANEP08246 267 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 PSMB8P28062 276 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 REG1BP48304 166 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ALDH3A2P51648 485 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RBM11P57052 281 aaKnown RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 LTC4SQ16873 150 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 PNLIPRP3Q17RR3 467 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 LHFPL3Q86UP9 236 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 OR5AK2Q8NH90 309 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 C4orf3Q8WVX3 66 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TSEN15Q8WW01 171 aaKnown RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RTN4IP1Q8WWV3 396 aaPredicted RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TFAP2CQ92754 450 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MRPL48Q96GC5 212 aaKnown RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 NR1H4Q96RI1 486 aaPredicted RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MYCBPQ99417 103 aaPredicted RBP8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 JAM3Q9BX67 310 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GON7Q9BXV9 100 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GFOD1Q9NXC2 390 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 FAM53CQ9NYF3 392 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TAS2R4Q9NYW5 299 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 SCOCQ9UIL1 159 aa8.57□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TMEM30CPA0ZSE6 113 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 SNTNA6NMZ2 147 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ORC5O43913 435 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 IGF1P05019 195 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 CD1BP29016 333 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 VHLP40337 213 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RASSF2P50749 326 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RAB40BQ12829 278 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GPR50Q13585 617 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RSU1Q15404 277 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 CXorf66Q5JRM2 361 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 C9orf66Q5T8R8 295 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 FAM53AQ6NSI3 398 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MOB3BQ86TA1 216 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 LINC00596Q86U02 117 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 OR8H1Q8NGG4 311 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 OR5M8Q8NGP6 311 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 OR2T10Q8NGZ9 312 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 S1PR3Q99500 378 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 FAM192AQ9GZU8 254 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MRPS18AQ9NVS2 196 aaKnown RBP8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RCC2Q9P258 522 aaKnown RBP8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ST3GAL6Q9Y274 331 aa8.56□□□□□ -1.04
SPTLC1P4-201ENST00000435997 NCBP2LA6PVI3 153 aaKnown RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ZNF736B4DX44 427 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 SDCBPO00560 298 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GEMIN2O14893 280 aaKnown RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 SLC31A2O15432 143 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TXNL1O43396 289 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RRP9O43818 475 aaKnown RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 OR7C1O76099 320 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 CDRT1O95170 752 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 FADS2O95864 444 aaKnown RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MOSP00540 346 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 LIMS3P0CW19 117 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 LIMS4P0CW20 117 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GZMHP20718 246 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GTF2A1P52655 376 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MPV17LQ2QL34 196 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 XAF1Q6GPH4 301 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ZNF497Q6ZNH5 498 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 SLC25A48Q6ZT89 311 aaKnown RBP8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GAPTQ8N292 157 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 OR52I1Q8NGK6 324 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 RHOXF1Q8NHV9 184 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 APH1BQ8WW43 257 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 PYDC1Q8WXC3 89 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ARL11Q969Q4 196 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 TMEM106AQ96A25 262 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 PRR25Q96S07 402 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 GPER1Q99527 375 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 ORC6Q9Y5N6 252 aa8.55□□□□□ -1.04
SPTLC1P4-201ENST00000435997 SEC14L6B5MCN3 397 aa8.54□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MAGEB3O15480 346 aa8.54□□□□□ -1.04
SPTLC1P4-201ENST00000435997 HTR3BO95264 441 aa8.54□□□□□ -1.04
SPTLC1P4-201ENST00000435997 MT-ND4P03905 459 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms