RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ERGIC1Q969X5 290 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 SMIM3Q9BZL3 60 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 ARV1Q9H2C2 271 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 COQ3Q9NZJ6 369 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 CELSR3Q9NYQ7 3312 aa14.17□□□□□ -0.14
LIMK1-203ENST00000435201 MBD3L4A6NDZ8 208 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 MBD3L3A6NE82 208 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 MBD3L5A6NJ08 208 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 PGLYRP1O75594 196 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 IGLV1-44P01699 117 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 GRPP07492 148 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 CECR9P0C854 216 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 VDAC1P21796 283 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 NKX2-1P43699 371 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 PJVKQ0ZLH3 352 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 CXorf67Q86X51 503 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 DMBX1Q8NFW5 382 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 MBD3L2Q8NHZ7 208 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 PLPPR1Q8TBJ4 325 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 CXXC4Q9H2H0 198 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 HES4Q9HCC6 221 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 DKK4Q9UBT3 224 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 ZDHHC8Q9ULC8 765 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 TMEM218A2RU14 115 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 C3orf80F5H4A9 247 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 H0YL77 283 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 MED6O75586 246 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 KITLGP21583 273 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 BTN1A1Q13410 526 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 NMSQ5H8A3 153 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 PXDC1Q5TGL8 231 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 PRSS33Q8NF86 280 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 OR10V1Q8NGI7 309 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 LILRB1Q8NHL6 650 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 STARD4Q96DR4 205 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 MS4A7Q9GZW8 240 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-203ENST00000435201 PARP11Q9NR21 331 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 TAAR3PQ9P1P4 343 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 TINAGQ9UJW2 476 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 TRAPPC2LQ9UL33 140 aa14.16□□□□□ -0.14
LIMK1-203ENST00000435201 MLNRO43193 412 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 ADAM20O43506 726 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 CGAP01215 116 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 F2RP25116 425 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 BEND4Q6ZU67 534 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 BHLHA15Q7RTS1 189 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-203ENST00000435201 FAM169BQ8N8A8 192 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF610Q8N9Z0 462 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 IL1F10Q8WWZ1 152 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 LRRC46Q96FV0 321 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 C11orf1Q9H5F2 150 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 ZNF71Q9NQZ8 489 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-203ENST00000435201 MBNL3Q9NUK0 354 aaKnown RBP14.15□□□□□ -0.14
LIMK1-203ENST00000435201 ERRFI1Q9UJM3 462 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-203ENST00000435201 WIPI2Q9Y4P8 454 aa14.15□□□□□ -0.14
LIMK1-203ENST00000435201 URB1O60287 2271 aaKnown RBP14.15□□□□□ -0.14
LIMK1-203ENST00000435201 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-203ENST00000435201 TIMM8AO60220 97 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-203ENST00000435201 FBXO24O75426 580 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 HAND1O96004 215 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 ZNF718Q3SXZ3 478 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 AKR1E2Q96JD6 320 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 GINS3Q9BRX5 216 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 TLNRD1Q9H1K6 362 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 OPN3Q9H1Y3 402 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-203ENST00000435201 FAM212BQ9NTI7 297 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-203ENST00000435201 ARID1AO14497 2285 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 SEC11BP0C7V7 166 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 MMP9P14780 707 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 GCH1P30793 250 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 LPAR6P43657 344 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 DEFA5Q01523 94 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 HMGN3Q15651 99 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 EIF2S3LQ2VIR3 472 aaKnown RBP14.14□□□□□ -0.15
LIMK1-203ENST00000435201 OR2C3Q8N628 320 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 HRH4Q9H3N8 390 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 OR1A1Q9P1Q5 309 aa14.14□□□□□ -0.15
LIMK1-203ENST00000435201 OR5H1A6NKK0 313 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 TNFSF12O43508 249 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 LMO1P25800 156 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 F2RL1P55085 397 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 EWSR1Q01844 656 aaKnown RBP eCLIP14.13□□□□□ -0.15
LIMK1-203ENST00000435201 TAGLNQ01995 201 aaKnown RBP14.13□□□□□ -0.15
LIMK1-203ENST00000435201 SWI5Q1ZZU3 235 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 MBNL2Q5VZF2 373 aaKnown RBP14.13□□□□□ -0.15
LIMK1-203ENST00000435201 Q6ZS92 163 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 BSCL2Q96G97 398 aaPredicted RBP14.13□□□□□ -0.15
LIMK1-203ENST00000435201 GPHA2Q96T91 129 aa14.13□□□□□ -0.15
LIMK1-203ENST00000435201 IGHV2OR16-5A0A0B4J2B6 119 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 IGHV1-18A0A0C4DH31 117 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 TMEM30CPA0ZSE6 113 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 C1QTNF9BB2RNN3 333 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 ABCD4O14678 606 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 TM4SF5O14894 197 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 HSPA12AO43301 675 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 ATG12O94817 140 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 SLC25A6P12236 298 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 CAV2P51636 162 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 MZT1Q08AG7 82 aa14.12□□□□□ -0.15
LIMK1-203ENST00000435201 TESK1Q15569 626 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms