RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 TUSC2O75896 110 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 CARD18P57730 90 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 B3GALT5-AS1P59052 145 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 ZNF726P1Q15940 193 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 FAM180AQ6UWF9 173 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 OR56B2PQ8NGI1 322 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 OR51H1Q8NH63 302 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 IMMP1LQ96LU5 166 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
TMCO3-202ENST00000434316 COX6A1P12074 109 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 GPM6AP51674 278 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 ZNF880Q6PDB4 577 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 C1orf87Q8N0U7 546 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 DNASE2BQ8WZ79 361 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 SNX22Q96L94 193 aa12.78□□□□□ -0.36
TMCO3-202ENST00000434316 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.36
TMCO3-202ENST00000434316 CCL2P13500 99 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 MMP9P14780 707 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 CCNOP22674 350 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 ZNF787Q6DD87 383 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 Q6ZRM9 215 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 GGNQ86UU5 652 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 STX12Q86Y82 276 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 OR13D1Q8NGV5 346 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 SH2D2AQ9NP31 389 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 FREM2Q5SZK8 3169 aa12.77□□□□□ -0.36
TMCO3-202ENST00000434316 IFNA5P01569 189 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 BCL2P10415 239 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 IAPPP10997 89 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 ARL16Q0P5N6 197 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 C20orf204Q6ZNR8 217 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 OR5D13Q8NGL4 314 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 ZNF391Q9UJN7 358 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 FRYLO94915 3013 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 FREM1Q5H8C1 2179 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 PI4KAP42356 2102 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.37
TMCO3-202ENST00000434316 LOC102723996A0A087X1L8 192 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 A0A1B0GU03 582 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 A0A1B0GV90 55 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 H0Y980 276 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 CBR3O75828 277 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 RNF224P0DH78 156 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 TLE1Q04724 770 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 FOXO1Q12778 655 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 Q6ZS49 121 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 MEGF10Q96KG7 1140 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 GPR35Q9HC97 309 aa12.77□□□□□ -0.37
TMCO3-202ENST00000434316 PHOX2AO14813 284 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 PSG2P11465 335 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 KIAA2026Q5HYC2 2103 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 C9orf135Q5VTT2 229 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 DPPA3Q6W0C5 159 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 TRAV1-1A0A0B4J248 108 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-202ENST00000434316 CLDN34H7C241 214 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 DFFBO76075 338 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 MMP7P09237 267 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-202ENST00000434316 RFPL3SP0C7P2 107 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 METTL15P1P0C7V9 234 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 RND2P52198 227 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 PRDX4Q13162 271 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 RPS19BP1Q86WX3 136 aaKnown RBP12.76□□□□□ -0.37
TMCO3-202ENST00000434316 H1FOOQ8IZA3 346 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-202ENST00000434316 CA5BP1Q8WTZ4 195 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 ABHD3Q8WU67 409 aa12.76□□□□□ -0.37
TMCO3-202ENST00000434316 CISD1Q9NZ45 108 aaKnown RBP12.76□□□□□ -0.37
TMCO3-202ENST00000434316 B4DEV8 164 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 CYB5R3P00387 301 aaPredicted RBP12.75□□□□□ -0.37
TMCO3-202ENST00000434316 F2RP25116 425 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 CLDN15P56746 228 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 FGF12P61328 243 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 MYPOPQ86VE0 399 aaPredicted RBP12.75□□□□□ -0.37
TMCO3-202ENST00000434316 Q8NFD4 153 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 OR10G4Q8NGN3 311 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 SPSB4Q96A44 273 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 PACRGQ96M98 296 aaPredicted RBP12.75□□□□□ -0.37
TMCO3-202ENST00000434316 ZNF488Q96MN9 340 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 HIPK2Q9H2X6 1198 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 CD55P08174 381 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 OR10D3Q8NH80 312 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 ZNF845Q96IR2 970 aaPredicted RBP12.75□□□□□ -0.37
TMCO3-202ENST00000434316 HIST1H2BLQ99880 126 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 C1QTNF5Q9BXJ0 243 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 SMOC1Q9H4F8 434 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 SDF2L1Q9HCN8 221 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 ATP23Q9Y6H3 246 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 GJE1A6NN92 205 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 SYNGR1O43759 233 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 HNF4GQ14541 408 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 OR8G1Q15617 311 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 OR2V1Q8NHB1 315 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 RNASE11Q8TAA1 199 aaKnown RBP12.75□□□□□ -0.37
TMCO3-202ENST00000434316 M1APQ8TC57 530 aa12.75□□□□□ -0.37
TMCO3-202ENST00000434316 RCC1LQ96I51 464 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms