RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 GMPPAQ96IJ6 420 aaPredicted RBP6.35□□□□□ -1.39
COL17A1-204ENST00000433822 HIST1H2AAQ96QV6 131 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 HDHD3Q9BSH5 251 aaPredicted RBP6.35□□□□□ -1.39
COL17A1-204ENST00000433822 PAPOLGQ9BWT3 736 aaKnown RBP6.35□□□□□ -1.39
COL17A1-204ENST00000433822 C1QTNF6Q9BXI9 259 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 PRRG4Q9BZD6 226 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 TMEM222Q9H0R3 208 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 LIME1Q9H400 295 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 C11orf1Q9H5F2 150 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF442Q9H7R0 627 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 FAM212BQ9NTI7 297 aaPredicted RBP6.35□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF629Q9UEG4 869 aaPredicted RBP6.35□□□□□ -1.39
COL17A1-204ENST00000433822 AMDHD2Q9Y303 409 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 MSRB2Q9Y3D2 182 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 STRAPQ9Y3F4 350 aaKnown RBP6.35□□□□□ -1.39
COL17A1-204ENST00000433822 LRRK2Q5S007 2527 aa6.35□□□□□ -1.39
COL17A1-204ENST00000433822 SHANK1Q9Y566 2161 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 A0A1B0GW64 132 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 ANKRD30BLA7E2S9 258 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 TRIM77I1YAP6 450 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 GPR31O00270 319 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 DEGS1O15121 323 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 ST8SIA3O43173 380 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 FBXO24O75426 580 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 SCO1O75880 301 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 OR7C1O76099 320 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 SNAPINO95295 136 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 APOC3P02656 99 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 MBPP02686 304 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 HEXAP06865 529 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 PATE4P0C8F1 98 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 SELEP16581 610 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 ITGA3P26006 1051 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 S100GP29377 79 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 OPRM1P35372 400 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 MEOX1P50221 254 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 RAB1AP62820 205 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 TGFBR3Q03167 851 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 MRPL49Q13405 166 aaKnown RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 MSMO1Q15800 293 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 GABRA6Q16445 453 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 MST1LQ2TV78 715 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 BEX5Q5H9J7 111 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 FAM76BQ5HYJ3 339 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 DHRS7BQ6IAN0 325 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 IGFL2Q6UWQ7 119 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 BTNL8Q6UX41 500 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 CLRN3Q8NCR9 226 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 C1orf162Q8NEQ5 155 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 LFNGQ8NES3 379 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 DEFB124Q8NES8 71 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 OR5D13Q8NGL4 314 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 OR4A4PQ8NGN8 299 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 LILRB1Q8NHL6 650 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 FAM216AQ8WUB2 273 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 TMED6Q8WW62 240 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 OR5P3Q8WZ94 311 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 LRRC46Q96FV0 321 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 WDYHV1Q96HA8 205 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 GINS3Q9BRX5 216 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 NKX6-2Q9C056 277 aaPredicted RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 TMEM9BQ9NQ34 198 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 ASF1BQ9NVP2 202 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 FBXL17Q9UF56 701 aa6.34□□□□□ -1.39
COL17A1-204ENST00000433822 PURGQ9UJV8 347 aaKnown RBP6.34□□□□□ -1.39
COL17A1-204ENST00000433822 RELNP78509 3460 aa6.34□□□□□ -1.4
COL17A1-204ENST00000433822 UTP20O75691 2785 aaKnown RBP6.34□□□□□ -1.4
COL17A1-204ENST00000433822 CREBBPQ92793 2442 aa6.34□□□□□ -1.4
COL17A1-204ENST00000433822 TRGV5A0A0B4J1U4 118 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 C3orf85A0A1B0GTC6 90 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 SPAARA0A1B0GVQ0 90 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 C5orf49A4QMS7 147 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 TMEM210A6NLX4 147 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF705EA8MWA4 302 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CDRT15L2A8MXV6 281 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 UMAD1C9J7I0 102 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 H0Y980 276 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 DNASE2O00115 360 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 LGALS8O00214 317 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 IL18BPO95998 194 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CD5P06127 495 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CELA3AP09093 270 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 SPP1P10451 314 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CTRB1P17538 263 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 PVALBP20472 110 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 VDAC1P21796 283 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 AADACP22760 399 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 LMO1P25800 156 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 GNRHRP30968 328 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CD200P41217 278 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 HAAOP46952 286 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 DVL1P1P54792 670 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 TMEM33P57088 247 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 S100A10P60903 97 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 BAXQ07812 192 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 BTN1A1Q13410 526 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF266Q14584 549 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 GNMTQ14749 295 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 GUSBP1Q15486 140 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 PXDC1Q5TGL8 231 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms