RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
COL6A3-207ENST00000433762 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
COL6A3-207ENST00000433762 IP6K3Q96PC2 410 aa11.67□□□□□ -0.54
COL6A3-207ENST00000433762 PARD6GQ9BYG4 376 aaPredicted RBP11.67□□□□□ -0.54
COL6A3-207ENST00000433762 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
COL6A3-207ENST00000433762 CXorf65A6NEN9 183 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 HLA-HP01893 362 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 DYNLT3P51808 116 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 RPL23AP62750 156 aaKnown RBP11.66□□□□□ -0.54
COL6A3-207ENST00000433762 CXorf66Q5JRM2 361 aaPredicted RBP11.66□□□□□ -0.54
COL6A3-207ENST00000433762 FAM58AQ8N1B3 248 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 OR10J5Q8NHC4 309 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 NEK7Q8TDX7 302 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 GLRX2Q9NS18 164 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 FBXO7Q9Y3I1 522 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 ARID1AO14497 2285 aa11.66□□□□□ -0.54
COL6A3-207ENST00000433762 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.65□□□□□ -0.54
COL6A3-207ENST00000433762 J3QT63 122 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 KHDC3LQ587J8 217 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 AKR1C8PQ5T2L2 129 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 SPINK14Q6IE38 97 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 C2CD4CQ8TF44 421 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 TTTY12Q9BZ98 90 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 PRRG4Q9BZD6 226 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 SIRT7Q9NRC8 400 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 TAAR3PQ9P1P4 343 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 EIF3GO75821 320 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL6A3-207ENST00000433762 IGHV2-5P01817 119 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
COL6A3-207ENST00000433762 PSMG3Q9BT73 122 aaPredicted RBP11.65□□□□□ -0.54
COL6A3-207ENST00000433762 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
COL6A3-207ENST00000433762 SEBOXQ9HB31 216 aaPredicted RBP11.65□□□□□ -0.54
COL6A3-207ENST00000433762 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 TXNL1O43396 289 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 CHST1O43916 411 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 IFNA17P01571 189 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 IGHV3-9P01782 118 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 SRP19P09132 144 aaKnown RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 PAX9P55771 341 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 OR1C1Q15619 314 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 ZFP82Q8N141 532 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 CD300LFQ8TDQ1 290 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 CALHM2Q9HA72 323 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 A0A1W2PPH5 198 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 B4DEV8 164 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 HSD17B6O14756 317 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 NDUFS6O75380 124 aaKnown RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 TMEM50AO95807 157 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 S100A9P06702 114 aaKnown RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 ACAA1P09110 424 aaPredicted RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF14P17017 642 aaPredicted RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 PMS2P11Q13670 270 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 SLC35E3Q7Z769 313 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 DLL3Q9NYJ7 618 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 CRIM1Q9NZV1 1036 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 KLF13Q9Y2Y9 288 aaPredicted RBP11.64□□□□□ -0.55
COL6A3-207ENST00000433762 MMP24Q9Y5R2 645 aa11.64□□□□□ -0.55
COL6A3-207ENST00000433762 A0A096LPE4 126 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 A6NLC8 198 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 FAM90A26D6RGX4 464 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 SYNGR1O43759 233 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 SCAF4O95104 1147 aaKnown RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 CNOT4O95628 575 aaKnown RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 IFNA5P01569 189 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 SERPINE2P07093 398 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 JMJD7P0C870 316 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 CCNOP22674 350 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 CLN3Q13286 438 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 SUMF1Q8NBK3 374 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 OR10V1Q8NGI7 309 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 NOVA1P51513 510 aaKnown RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 RPS23P62266 143 aaKnown RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 Q6P435 159 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 NUFIP2Q7Z417 695 aaKnown RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 MCEMP1Q8IX19 187 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 TMEM251Q8N6I4 163 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 ZFP62Q8NB50 900 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 OR1K1Q8NGR3 316 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF251Q9BRH9 671 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 LIN7CQ9NUP9 197 aaKnown RBP11.63□□□□□ -0.55
COL6A3-207ENST00000433762 POLDIP2Q9Y2S7 368 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 FREM1Q5H8C1 2179 aa11.63□□□□□ -0.55
COL6A3-207ENST00000433762 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 OR2C1O95371 312 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 NGFP01138 241 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 OR13C7P0DN81 318 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 SRYQ05066 204 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 ICAM4Q14773 271 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 MSMO1Q15800 293 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 KRBOX4Q5JUW0 171 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms