RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LRRK2Q5S007 2527 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 MYH7BA7E2Y1 1941 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 GREB1Q4ZG55 1949 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 PLXNB3Q9ULL4 1909 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 PLXNA4Q9HCM2 1894 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 SLC5A10A0PJK1 596 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 RPL36A-HNRNPH2H7BZ11 118 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 RTL8CO15255 209 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 NDUFS5O43920 106 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 TNFSF15O95150 251 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 RCBTB2O95199 551 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 BRI3O95415 125 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 APOA1P02647 267 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 CELP19835 753 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 PRKACBP22694 351 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 DNASE1L1P49184 302 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR12D2P58182 307 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 EIF3IQ13347 325 aaKnown RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ITGB3BPQ13352 177 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 GUSBP1Q15486 140 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 SYT6Q5T7P8 510 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 HHATQ5VTY9 493 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 FAM104BQ5XKR9 115 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 DEGS2Q6QHC5 323 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 Q6ZSR6 202 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ITPRIPQ8IWB1 547 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF615Q8N8J6 731 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR4K2Q8NGD2 314 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR5M1Q8NGP8 315 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR9A2Q8NGT5 310 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR6K2Q8NGY2 324 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 LRRC20Q8TCA0 184 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 SPPL2BQ8TCT7 592 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 CCDC12Q8WUD4 166 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 RTN4IP1Q8WWV3 396 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMEM159Q96B96 161 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ADTRPQ96IZ2 230 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZFP3Q96NJ6 502 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 SPZ1Q9BXG8 430 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 PRRG3Q9BZD7 231 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 LINC00574Q9H8X3 128 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 SND1-IT1Q9HBX3 110 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ACOT13Q9NPJ3 140 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 CYTL1Q9NRR1 136 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 MAT2BQ9NZL9 334 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 MARCOQ9UEW3 520 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ENOPH1Q9UHY7 261 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 NXT1Q9UKK6 140 aaKnown RBP1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 POFUT2Q9Y2G5 429 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF835Q9Y2P0 537 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 KNTC1P50748 2209 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 VWA8A3KMH1 1905 aa1.74□□□□□ -2.13
HMGB1P27-201ENST00000431429 PCNX1Q96RV3 2341 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 THADAQ6YHU6 1953 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGHV3OR16-8A0A075B7F1 116 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 TRAV40A0A0B4J280 105 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 C7orf66A4D0T2 115 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 MGAT4DA6NG13 374 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 C16orf90A8MZG2 172 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 CENPBD1B2RD01 187 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 MKRN2OSH3BPM6 223 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 K7ERQ8 282 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZW10O43264 779 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR7C2O60412 319 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGLV3-19P01714 112 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 CD99P14209 185 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ARR3P36575 388 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 TAS2R43P59537 309 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 KRTAP10-8P60410 259 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 PPP1CAP62136 330 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 RPL10AP62906 217 aaKnown RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 GRB2P62993 217 aaKnown RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZBTB6Q15916 424 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 IGFL3Q6UXB1 125 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 Q6ZT83 130 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 HMGN2P46Q86SG4 172 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZBTB8OSQ8IWT0 167 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 BBS7Q8IWZ6 715 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 NELFCDQ8IXH7 590 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ORMDL3Q8N138 153 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 CDRT4Q8N9R6 151 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR2Z1Q8NG97 314 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR4M2Q8NGB6 313 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 OR13G1Q8NGZ3 307 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 HGDQ93099 445 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 Q96MT0 163 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 RILPQ96NA2 401 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 CTRCQ99895 268 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 TMED9Q9BVK6 235 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 CCDC94Q9BW85 323 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 RSPO3Q9BXY4 272 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ZNF717Q9BY31 904 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 WDR55Q9H6Y2 383 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 PLEKHA1Q9HB21 404 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 VCX3AQ9NNX9 186 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 ASCL3Q9NQ33 180 aa1.73□□□□□ -2.13
HMGB1P27-201ENST00000431429 C12orf4Q9NQ89 552 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms