RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 OR8G5Q8NG78 346 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 ABHD14BQ96IU4 210 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 MS4A7Q9GZW8 240 aaPredicted RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 TAF9BQ9HBM6 251 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 OR2S2Q9NQN1 319 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 GLS2Q9UI32 602 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 OR2W1Q9Y3N9 320 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
HOXC4-202ENST00000430889 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
HOXC4-202ENST00000430889 H0Y980 276 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 CDIPTO14735 213 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 PGLYRP1O75594 196 aaPredicted RBP11.8□□□□□ -0.52
HOXC4-202ENST00000430889 JTBO76095 146 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 SCGB1D2O95969 90 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF44P15621 663 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 EIF2S3P41091 472 aaKnown RBP11.8□□□□□ -0.52
HOXC4-202ENST00000430889 SULT1A2P50226 295 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 OR8G1Q15617 311 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 HMGN3Q15651 99 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 MEX3BQ6ZN04 569 aaKnown RBP11.8□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 SPERTQ8NA61 448 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 OR5D13Q8NGL4 314 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 MMP26Q9NRE1 261 aa11.8□□□□□ -0.52
HOXC4-202ENST00000430889 CHD3Q12873 2000 aaKnown RBP11.79□□□□□ -0.52
HOXC4-202ENST00000430889 IGHV1-18A0A0C4DH31 117 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 IGLV2-14P01704 120 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 LMO1P25800 156 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 P2RY6Q15077 328 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 TESK1Q15569 626 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 Q6ZR03 302 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 GPHA2Q96T91 129 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
HOXC4-202ENST00000430889 OR1A1Q9P1Q5 309 aa11.79□□□□□ -0.52
HOXC4-202ENST00000430889 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
HOXC4-202ENST00000430889 IGHV2OR16-5A0A0B4J2B6 119 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 SIRPB1O00241 398 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 HSD17B6O14756 317 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 F2RP25116 425 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 HOXC12P31275 282 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 MBNL2Q5VZF2 373 aaKnown RBP11.78□□□□□ -0.52
HOXC4-202ENST00000430889 EIF5AL1Q6IS14 154 aaKnown RBP11.78□□□□□ -0.52
HOXC4-202ENST00000430889 ATRAIDQ6UW56 229 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 IL34Q6ZMJ4 242 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 OR10J5Q8NHC4 309 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 LYPD6BQ8NI32 183 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 TINAGQ9UJW2 476 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 CFAP47Q6ZTR5 3102 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 OR5H1A6NKK0 313 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 SH2D1BO14796 132 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 NXPH2O95156 264 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 VDAC1P21796 283 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 LPAR6P43657 344 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 BTNL8Q6UX41 500 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 BHLHA15Q7RTS1 189 aaPredicted RBP11.78□□□□□ -0.52
HOXC4-202ENST00000430889 ZNF695Q8IW36 515 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 SPIN2AQ99865 258 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 SPIN2BQ9BPZ2 258 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 FAM215AQ9Y5M1 114 aa11.78□□□□□ -0.52
HOXC4-202ENST00000430889 TMEM218A2RU14 115 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.53
HOXC4-202ENST00000430889 PITX3O75364 302 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 HAND1O96004 215 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 HEXAP06865 529 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 ADCYAP1P18509 176 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 ID3Q02535 119 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 PXDC1Q5TGL8 231 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 ODF3L1Q8IXM7 274 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 C1orf174Q8IYL3 243 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 CMTM1Q8IZ96 169 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 RBMXL3Q8N7X1 1067 aaKnown RBP11.77□□□□□ -0.53
HOXC4-202ENST00000430889 OR10V1Q8NGI7 309 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 SMIM3Q9BZL3 60 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 COQ3Q9NZJ6 369 aa11.77□□□□□ -0.53
HOXC4-202ENST00000430889 ERRFI1Q9UJM3 462 aaPredicted RBP11.77□□□□□ -0.53
HOXC4-202ENST00000430889 TRAV39A0A0B4J263 110 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 ABCD4O14678 606 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 ADAM20O43506 726 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 PSPNO60542 156 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 GRPP07492 148 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
HOXC4-202ENST00000430889 CLEC9AQ6UXN8 241 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
HOXC4-202ENST00000430889 C17orf50Q8WW18 174 aa11.76□□□□□ -0.53
HOXC4-202ENST00000430889 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms