RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 HABP2Q14520 560 aaPredicted RBP11.83□□□□□ -0.52
RBM39-212ENST00000429968 SPIN3Q5JUX0 258 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 DPPA2Q7Z7J5 298 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 OR1J1Q8NGS3 322 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 NINJ1Q92982 152 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 PKIBQ9C010 78 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 OR1A1Q9P1Q5 309 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 DKK4Q9UBT3 224 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
RBM39-212ENST00000429968 CDIPTO14735 213 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 MLNRO43193 412 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 FBXO24O75426 580 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 PF4V1P10720 104 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 ZNF44P15621 663 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 FAM76BQ5HYJ3 339 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 ZNF880Q6PDB4 577 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 LGI3Q8N145 548 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 ADAT1Q9BUB4 502 aaKnown RBP11.83□□□□□ -0.52
RBM39-212ENST00000429968 PARP12Q9H0J9 701 aaKnown RBP11.83□□□□□ -0.52
RBM39-212ENST00000429968 TMEM222Q9H0R3 208 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 TMEM231Q9H6L2 316 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 TAF9BQ9HBM6 251 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 IL19Q9UHD0 177 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 FZR1Q9UM11 496 aa11.83□□□□□ -0.52
RBM39-212ENST00000429968 CADP27708 2225 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 AQP7O14520 342 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 TK1P04183 234 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 LPAR6P43657 344 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 ASCL1P50553 236 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 UCP2P55851 309 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 ERVK11-1P61568 191 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.525e-7■■■□□ 16.7
RBM39-212ENST00000429968 ZNF826PQ6ZT77 177 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 CXorf67Q86X51 503 aaPredicted RBP11.82□□□□□ -0.52
RBM39-212ENST00000429968 MARC2Q969Z3 335 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 KIRREL1Q96J84 757 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 SYT3Q9BQG1 590 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 ZC4H2Q9NQZ6 224 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 TINAGQ9UJW2 476 aa11.82□□□□□ -0.52
RBM39-212ENST00000429968 TRAV17A0A0B4J275 112 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 ZNF705EA8MWA4 302 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 K7EM74 188 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 ABCD4O14678 606 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 NXPH3O95157 252 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 OR2H2O95918 312 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 COX5AP20674 150 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 IL13RA2Q14627 380 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 ZNF324BQ6AW86 544 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 SELENOHQ8IZQ5 122 aaKnown RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 CCDC71LQ8N9Z2 235 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 PRSS33Q8NF86 280 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 KLF14Q8TD94 323 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 RNF141Q8WVD5 230 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 NARS2Q96I59 477 aaKnown RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 C11orf1Q9H5F2 150 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 RFNGQ9Y644 331 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 WNT9BO14905 357 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 DEGS1O15121 323 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 TNFSF13O75888 250 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 SLC34A2O95436 690 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 IGLV2-14P01704 120 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 GRPP07492 148 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 NHLH2Q02577 135 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 CCDC36Q8IYA8 594 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 RPRMLQ8N4K4 120 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 RTL8AQ9BWD3 113 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 OPN3Q9H1Y3 402 aaPredicted RBP11.81□□□□□ -0.52
RBM39-212ENST00000429968 PIGMQ9H3S5 423 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 MUC6Q6W4X9 2439 aa11.81□□□□□ -0.52
RBM39-212ENST00000429968 GVINP1Q7Z2Y8 2422 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 A0A0G2JRQ6 117 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 LRP5LA4QPB2 252 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 GPR31O00270 319 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
RBM39-212ENST00000429968 CEACAM4O75871 244 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 TGFBR3Q03167 851 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 IL1F10Q8WWZ1 152 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 TMEM56Q96MV1 263 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 NRIP2Q9BQI9 281 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 PLK3Q9H4B4 646 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 FAM96BQ9Y3D0 163 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 SPTBN2O15020 2390 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 TRBV6-6A0A0A6YYG2 114 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 KIR2DS1A0A191URI9 304 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 IQCF6A8MYZ5 107 aa11.8□□□□□ -0.52
RBM39-212ENST00000429968 PRSS44E7EML9 344 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms