RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PLCXD1	Q9NUJ7	323 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	DNAH9	Q9NYC9	4486 aa		14.11	□□□□□ -0.15
MRPL28-203	ENST00000429738	TRAV39	A0A0B4J263	110 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	EFCAB10	A6NFE3	127 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738		M0QZK8	103 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	IGHV3-7	P01780	117 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	CD1A	P06126	327 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	LPL	P06858	475 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	GZMH	P20718	246 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	CAPG	P40121	348 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	TAS2R43	P59537	309 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	DOC2B	Q14184	412 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	DIAPH2-AS1	Q14236	149 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	TCTEX1D4	Q5JR98	221 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	LYPD6	Q86Y78	171 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	C8orf59	Q8N0T1	100 aa	Predicted RBP	14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	WFDC9	Q8NEX5	89 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	CAPSL	Q8WWF8	208 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	TOMM40L	Q969M1	308 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	OR14A2	Q96R54	314 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	RCC2	Q9P258	522 aa	Known RBP	14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	CKLF	Q9UBR5	152 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	PSORS1C1	Q9UIG5	152 aa		14.1	□□□□□ -0.15
MRPL28-203	ENST00000429738	TMEM30CP	A0ZSE6	113 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	C15orf65	H3BRN8	121 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	MPIG6B	O95866	241 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	FAM106CP	P0CH98	169 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	GTF2F2	P13984	249 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	RAB7A	P51149	207 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	MADCAM1	Q13477	382 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	GPR176	Q14439	515 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	SLC22A6	Q4U2R8	563 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	CDH26	Q8IXH8	852 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	FKBP14	Q9NWM8	211 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	MOB4	Q9Y3A3	225 aa		14.09	□□□□□ -0.15
MRPL28-203	ENST00000429738	SH2D7	A6NKC9	451 aa	Predicted RBP	14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	SNRNP70	P08621	437 aa	Known RBP	14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	GNG10	P50151	68 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	LTC4S	Q16873	150 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	ZNF497	Q6ZNH5	498 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	CENPV	Q7Z7K6	275 aa	Predicted RBP	14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	OR8H3	Q8N146	312 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	DRAM1	Q8N682	238 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	OR52M1	Q8NGK5	317 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	OR56B4	Q8NH76	319 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	MRPS24	Q96EL2	167 aa	Known RBP	14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	DERL3	Q96Q80	235 aa		14.08	□□□□□ -0.16
MRPL28-203	ENST00000429738	PNMA8C	A0A1B0GUJ8	204 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738		A0A1W2PPK0	400 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	ORC5	O43913	435 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	MT-ND4	P03905	459 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	VSIG8	P0DPA2	414 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	WNT4	P56705	351 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	ZNF816	Q0VGE8	651 aa	Predicted RBP	14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	ATAD3C	Q5T2N8	411 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	AHSA2	Q719I0	299 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	GAPT	Q8N292	157 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	LINC00311	Q8N616	119 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	C8orf31	Q8N9H6	132 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	MUL1	Q969V5	352 aa		14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738	MRPS28	Q9Y2Q9	187 aa	Known RBP	14.07	□□□□□ -0.16
MRPL28-203	ENST00000429738		A0A1W2PPE3	182 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738		K7EIL1	84 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	MYL12B	O14950	172 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	IGLL1	P15814	213 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	CEL	P19835	753 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	CD33	P20138	364 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	EBI3	Q14213	229 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738		Q3ZCU0	254 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	C10orf99	Q6UWK7	81 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	GLIPR1L1	Q6UWM5	242 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	JAGN1	Q8N5M9	183 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	NANOGP1	Q8N7R0	232 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	C5orf56	Q8N8D9	126 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	OR10X1	Q8NGY0	326 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	TFAP2C	Q92754	450 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	MYDGF	Q969H8	173 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	ARL11	Q969Q4	196 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	SPACA1	Q9HBV2	294 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	GFOD1	Q9NXC2	390 aa		14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	TSSC4	Q9Y5U2	329 aa	Predicted RBP	14.06	□□□□□ -0.16
MRPL28-203	ENST00000429738	HSD17B6	O14756	317 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	FGF16	O43320	207 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	MAS1	P04201	325 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	FAM53A	Q6NSI3	398 aa	Predicted RBP	14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	C11orf87	Q6NUJ2	197 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	STX19	Q8N4C7	294 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	BPIFB6	Q8NFQ5	453 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	THRSP	Q92748	146 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	ST6GALNAC6	Q969X2	333 aa		14.05	□□□□□ -0.16
MRPL28-203	ENST00000429738	IGHV1-3	A0A0C4DH29	117 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738		A0A1W2PRX2	142 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	TCRBV4S1A1T	A0A5B7	111 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	FAM90A10P	A6NDY2	464 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	FAM90A7P	A6NKC0	464 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	FAM90A23P	A8MXZ1	464 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	AIP	O00170	330 aa		14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	SDCBP	O00560	298 aa	Predicted RBP	14.04	□□□□□ -0.16
MRPL28-203	ENST00000429738	IGKV1D-33	P01593	117 aa		14.04	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms