RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ALG8Q9BVK2 526 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 FAM192AQ9GZU8 254 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 MRPS18AQ9NVS2 196 aaKnown RBP12.98□□□□□ -0.33
VARS-216ENST00000428445 DHDHQ9UQ10 334 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
VARS-216ENST00000428445 CCRL2O00421 344 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 CDRT1O95170 752 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 RAB3AP20336 220 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 GPR12P47775 334 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 SOX2P48431 317 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 DCTN2Q13561 401 aaKnown RBP12.97□□□□□ -0.33
VARS-216ENST00000428445 PNLIPRP3Q17RR3 467 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 KLHL22Q53GT1 634 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 ZNF529Q6P280 563 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 TEX38Q6PEX7 206 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 SUMF2Q8NBJ7 301 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 RHOXF1Q8NHV9 184 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 GPER1Q99527 375 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 AMBNQ9NP70 447 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 PLSCR3Q9NRY6 295 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 SCOCQ9UIL1 159 aa12.97□□□□□ -0.33
VARS-216ENST00000428445 EI24O14681 340 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 GAPDHP04406 335 aaKnown RBP12.96□□□□□ -0.33
VARS-216ENST00000428445 GABRB1P18505 474 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 GTF2A1P52655 376 aaPredicted RBP12.96□□□□□ -0.33
VARS-216ENST00000428445 GPR50Q13585 617 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 EBI3Q14213 229 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 RSU1Q15404 277 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 CCDC58Q4VC31 144 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 Q8N6K4 173 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 TSEN15Q8WW01 171 aaKnown RBP12.96□□□□□ -0.33
VARS-216ENST00000428445 HSPB9Q9BQS6 159 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 DPCDQ9BVM2 203 aaPredicted RBP12.96□□□□□ -0.33
VARS-216ENST00000428445 JAM3Q9BX67 310 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 ABCG5Q9H222 651 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 IFT22Q9H7X7 185 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 ERVK13-1Q9NX77 482 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 TAS2R4Q9NYW5 299 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 ING4Q9UNL4 249 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 GMPPBQ9Y5P6 360 aa12.96□□□□□ -0.33
VARS-216ENST00000428445 SLC31A2O15432 143 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 CD2P06729 351 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 NHLRC4P0CG21 123 aaPredicted RBP12.95□□□□□ -0.34
VARS-216ENST00000428445 F2RL1P55085 397 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
VARS-216ENST00000428445 KIR2DS1Q14954 304 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 NHLRC3Q5JS37 347 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 OR52M1Q8NGK5 317 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 PYDC1Q8WXC3 89 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 RGP1Q92546 391 aaPredicted RBP12.95□□□□□ -0.34
VARS-216ENST00000428445 ARL11Q969Q4 196 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 ORAI1Q96D31 301 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 CYYR1Q96J86 154 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 FAM118AQ9NWS6 357 aa12.95□□□□□ -0.34
VARS-216ENST00000428445 PAK1IP1Q9NWT1 392 aaPredicted RBP12.95□□□□□ -0.34
VARS-216ENST00000428445 RPL36Q9Y3U8 105 aaKnown RBP12.95□□□□□ -0.34
VARS-216ENST00000428445 DNAH7Q8WXX0 4024 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 A0A1W2PP11 408 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 SEC14L6B5MCN3 397 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 C15orf65H3BRN8 121 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 AP4M1O00189 453 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 RAMP3O60896 148 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 GP2P55259 537 aaKnown RBP12.94□□□□□ -0.34
VARS-216ENST00000428445 Q3ZCU0 254 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 CXorf66Q5JRM2 361 aaPredicted RBP12.94□□□□□ -0.34
VARS-216ENST00000428445 LINC00596Q86U02 117 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 TGIF2LXQ8IUE1 241 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 C8orf31Q8N9H6 132 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 TMEM104Q8NE00 496 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 OR5M8Q8NGP6 311 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 IL36GQ9NZH8 169 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 ST3GAL6Q9Y274 331 aa12.94□□□□□ -0.34
VARS-216ENST00000428445 SACSQ9NZJ4 4579 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 SDCBPO00560 298 aaPredicted RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 GEMIN2O14893 280 aaKnown RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 CDX1P47902 265 aaPredicted RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 XAF1Q6GPH4 301 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 RPL22L1Q6P5R6 122 aaKnown RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 C5orf24Q7Z6I8 188 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 OR2T10Q8NGZ9 312 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 OR8U1Q8NH10 309 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 GPR148Q8TDV2 347 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 RTN4IP1Q8WWV3 396 aaPredicted RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 S1PR3Q99500 378 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 C9orf16Q9BUW7 83 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
VARS-216ENST00000428445 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
VARS-216ENST00000428445 LOC100130705A0A1B0GUX0 176 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 H3BNX3 289 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 ORC5O43913 435 aa12.92□□□□□ -0.34
VARS-216ENST00000428445 CSTBP04080 98 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms