RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 ZNF552Q9H707 407 aaPredicted RBP13.01□□□□□ -0.33
SCAP-206ENST00000428413 GPR27Q9NS67 375 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 FAM27BQ5VT28 67 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 HIST1H2BAQ96A08 127 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 MSL2Q9HCI7 577 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 LIPGQ9Y5X9 500 aa13.01□□□□□ -0.33
SCAP-206ENST00000428413 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
SCAP-206ENST00000428413 E5RGE8 158 aa13□□□□□ -0.33
SCAP-206ENST00000428413 PROB1E7EW31 1015 aa13□□□□□ -0.33
SCAP-206ENST00000428413 LDLRAD4O15165 306 aa13□□□□□ -0.33
SCAP-206ENST00000428413 HKR1P10072 659 aa13□□□□□ -0.33
SCAP-206ENST00000428413 SRD5A2P31213 254 aa13□□□□□ -0.33
SCAP-206ENST00000428413 SLC10A1Q14973 349 aa13□□□□□ -0.33
SCAP-206ENST00000428413 ZIC4Q8N9L1 334 aa13□□□□□ -0.33
SCAP-206ENST00000428413 SLC30A7Q8NEW0 376 aa13□□□□□ -0.33
SCAP-206ENST00000428413 SPEM2Q0P670 501 aa13□□□□□ -0.33
SCAP-206ENST00000428413 AWAT1Q58HT5 328 aa13□□□□□ -0.33
SCAP-206ENST00000428413 WNT5BQ9H1J7 359 aa13□□□□□ -0.33
SCAP-206ENST00000428413 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
SCAP-206ENST00000428413 FAM3AP98173 230 aa13□□□□□ -0.33
SCAP-206ENST00000428413 TGFBR3Q03167 851 aa13□□□□□ -0.33
SCAP-206ENST00000428413 GAMTQ14353 236 aa13□□□□□ -0.33
SCAP-206ENST00000428413 MRPL14Q6P1L8 145 aaKnown RBP13□□□□□ -0.33
SCAP-206ENST00000428413 SEC11CQ9BY50 192 aa13□□□□□ -0.33
SCAP-206ENST00000428413 RHBDL1O75783 438 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 CST4P01036 141 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 PBDC1Q9BVG4 233 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 NMES1Q9C002 83 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 INTS1Q8N201 2190 aaKnown RBP12.99□□□□□ -0.33
SCAP-206ENST00000428413 COLCA2A8K830 154 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 PPP1R2P9O14990 202 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 SRSF10O75494 262 aaKnown RBP12.99□□□□□ -0.33
SCAP-206ENST00000428413 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
SCAP-206ENST00000428413 ADCYAP1P18509 176 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 DHODHQ02127 395 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 DHRS11Q6UWP2 260 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 NRIP2Q9BQI9 281 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 ANGPTL4Q9BY76 406 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 SEBOXQ9HB31 216 aaPredicted RBP12.99□□□□□ -0.33
SCAP-206ENST00000428413 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 CEBPZOSA8MTT3 80 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 CD8AP01732 235 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 OPN1MWP04001 364 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 OPN1MW2P0DN77 364 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 OPN1MW3P0DN78 364 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 SLC25A4P12235 298 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 MPV17LQ2QL34 196 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 NUFIP2Q7Z417 695 aaKnown RBP12.99□□□□□ -0.33
SCAP-206ENST00000428413 OR2C3Q8N628 320 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 OR4A4PQ8NGN8 299 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 LIME1Q9H400 295 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 PNRC2Q9NPJ4 139 aaKnown RBP12.99□□□□□ -0.33
SCAP-206ENST00000428413 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
SCAP-206ENST00000428413 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 IGHMP01871 453 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 RAB4AP20338 218 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 RAB5AP20339 215 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 DYNLT3P51808 116 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 PYY3Q5JQD4 70 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 PPP1R32Q7Z5V6 425 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 WDR5BQ86VZ2 330 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 MMP26Q9NRE1 261 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 LILRA1O75019 489 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 MELTFP08582 738 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 OR8U8P0C7N1 319 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 CSRP1P21291 193 aaKnown RBP12.98□□□□□ -0.33
SCAP-206ENST00000428413 MEOX1P50221 254 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 PKIAP61925 76 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 VAX1Q5SQQ9 334 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 OR1J1Q8NGS3 322 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
SCAP-206ENST00000428413 IMMP1LQ96LU5 166 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 OR2J1Q9GZK6 312 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 OPN3Q9H1Y3 402 aaPredicted RBP12.98□□□□□ -0.33
SCAP-206ENST00000428413 CACNG5Q9UF02 275 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 A0A087WZY1 265 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 TIMM8AO60220 97 aaPredicted RBP12.98□□□□□ -0.33
SCAP-206ENST00000428413 TECTAO75443 2155 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 Q96M66 194 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 RSG1Q9BU20 258 aa12.98□□□□□ -0.33
SCAP-206ENST00000428413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.97□□□□□ -0.331e-6■■■□□ 15.3
SCAP-206ENST00000428413 ZGRF1Q86YA3 2104 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 MPPED1O15442 326 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 IFI6P09912 130 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 NKX6-1P78426 367 aaPredicted RBP12.97□□□□□ -0.33
SCAP-206ENST00000428413 SIRT7Q9NRC8 400 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 PSG2P11465 335 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 QRFPP83859 136 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 Q0VFX4 171 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 GNG12Q9UBI6 72 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 TOX3O15405 576 aaPredicted RBP12.97□□□□□ -0.33
SCAP-206ENST00000428413 TMEM127O75204 238 aa12.97□□□□□ -0.33
SCAP-206ENST00000428413 SCAF4O95104 1147 aaKnown RBP12.97□□□□□ -0.33
SCAP-206ENST00000428413 CTSDP07339 412 aaPredicted RBP12.97□□□□□ -0.33
SCAP-206ENST00000428413 CD46P15529 392 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms