RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 LINC00311Q8N616 119 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 C8orf31Q8N9H6 132 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 GHSRQ92847 366 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 ORAI1Q96D31 301 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 PGLYRP3Q96LB9 341 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 ZNF184Q99676 751 aaPredicted RBP16.5■□□□□ 0.23
UBXN4-204ENST00000426921 CLEC2DQ9UHP7 191 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 ING4Q9UNL4 249 aa16.5■□□□□ 0.23
UBXN4-204ENST00000426921 TRAV39A0A0B4J263 110 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 HSD17B6O14756 317 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 DUS4LO95620 317 aaKnown RBP16.49■□□□□ 0.23
UBXN4-204ENST00000426921 BAG2O95816 211 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 CLIC3O95833 236 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 SERPINA2P20848 420 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 RPS11P62280 158 aaKnown RBP eCLIP16.49■□□□□ 0.23
UBXN4-204ENST00000426921 Q499Y3 187 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 YIF1BQ5BJH7 314 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 IZUMO1Q8IYV9 350 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 CHPT1Q8WUD6 406 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 S100A13Q99584 98 aa16.49■□□□□ 0.23
UBXN4-204ENST00000426921 RCC2Q9P258 522 aaKnown RBP16.49■□□□□ 0.23
UBXN4-204ENST00000426921 A0A1W2PP11 408 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 MAGEA13PA6NCF6 341 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 EBAG9O00559 213 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 ORC5O43913 435 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 IGKV1D-33P01593 117 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 IGKV1-33P01594 117 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 IGHG2P01859 326 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 GTF2F2P13984 249 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 HES1Q14469 280 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 Q3ZCU0 254 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 KHDC1LQ5JSQ8 128 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 ZNF497Q6ZNH5 498 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 LINC00482Q8N8I6 264 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 TMEM80Q96HE8 168 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 C8orf4Q9NR00 106 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 CKLFQ9UBR5 152 aa16.48■□□□□ 0.23
UBXN4-204ENST00000426921 TRAV8-7A0A075B6U6 113 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 TRBV5-7A0A0A0MS05 114 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 IGHV1-3A0A0C4DH29 117 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 MED21Q13503 144 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 GPR176Q14439 515 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 SLC22A6Q4U2R8 563 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 TTC23Q5W5X9 447 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 ETV3LQ6ZN32 361 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 Q8N6K4 173 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 PACRGLQ8N7B6 248 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 SETD9Q8NE22 299 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 ARL11Q969Q4 196 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 MRPS24Q96EL2 167 aaKnown RBP16.47■□□□□ 0.23
UBXN4-204ENST00000426921 SPACA1Q9HBV2 294 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 GFOD1Q9NXC2 390 aa16.47■□□□□ 0.23
UBXN4-204ENST00000426921 A0A1W2PPE3 182 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 CCRL2O00421 344 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 MT-ND4P03905 459 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 GAPDHP04406 335 aaKnown RBP16.46■□□□□ 0.23
UBXN4-204ENST00000426921 SLC6A1P30531 599 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 RPL23AP62750 156 aaKnown RBP16.46■□□□□ 0.23
UBXN4-204ENST00000426921 ADARB1P78563 741 aaKnown RBP16.46■□□□□ 0.23
UBXN4-204ENST00000426921 ATAD3CQ5T2N8 411 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 ZNF329Q86UD4 541 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 GAPTQ8N292 157 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 ST6GALNAC6Q969X2 333 aa16.46■□□□□ 0.23
UBXN4-204ENST00000426921 NOL4LQ96MY1 436 aaPredicted RBP16.46■□□□□ 0.23
UBXN4-204ENST00000426921 SDCBPO00560 298 aaPredicted RBP16.45■□□□□ 0.22
UBXN4-204ENST00000426921 EGFEM1PQ0D2K5 195 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 TMEM30BQ3MIR4 351 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 LYPD6Q86Y78 171 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 TGIF2LXQ8IUE1 241 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 CDH26Q8IXH8 852 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 COMMD1Q8N668 190 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 TMEM104Q8NE00 496 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 OR51D1Q8NGF3 324 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 CYGBQ8WWM9 190 aa16.45■□□□□ 0.22
UBXN4-204ENST00000426921 EAF1Q96JC9 268 aaPredicted RBP16.45■□□□□ 0.22
UBXN4-204ENST00000426921 CHCHD3Q9NX63 227 aaKnown RBP16.45■□□□□ 0.22
UBXN4-204ENST00000426921 SERPINE3A8MV23 424 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 K7EIL1 84 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 AIPO00170 330 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 REG1BP48304 166 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 THBS3P49746 956 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 ZNF137PP52743 207 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 TAS2R43P59537 309 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 HNF4GQ14541 408 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 OR2W3Q7Z3T1 314 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 SLC35E3Q7Z769 313 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 MRPL41Q8IXM3 137 aaKnown RBP16.44■□□□□ 0.22
UBXN4-204ENST00000426921 STX19Q8N4C7 294 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 ZFP41Q8N8Y5 198 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 NEK7Q8TDX7 302 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 RTN4IP1Q8WWV3 396 aaPredicted RBP16.44■□□□□ 0.22
UBXN4-204ENST00000426921 GGHQ92820 318 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 MUL1Q969V5 352 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 OR14A2Q96R54 314 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 ZFP57Q9NU63 452 aa16.44■□□□□ 0.22
UBXN4-204ENST00000426921 LIN7CQ9NUP9 197 aaKnown RBP16.44■□□□□ 0.22
UBXN4-204ENST00000426921 CNOT2Q9NZN8 540 aaKnown RBP16.44■□□□□ 0.22
UBXN4-204ENST00000426921 MRPS28Q9Y2Q9 187 aaKnown RBP16.44■□□□□ 0.22
UBXN4-204ENST00000426921 FAM90A10PA6NDY2 464 aa16.43■□□□□ 0.22
UBXN4-204ENST00000426921 FAM90A7PA6NKC0 464 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms