RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 C11orf87Q6NUJ2 197 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 ZNF565Q8N9K5 539 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 COQ2Q96H96 371 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 SLC5A7Q9GZV3 580 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 OR1A1Q9P1Q5 309 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 MPC2O95563 127 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 SLC25A4P12235 298 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 CYCSP99999 105 aaKnown RBP22.24■■□□□ 1.15
LDB1-202ENST00000425280 AESQ08117 197 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 OPCMLQ14982 345 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 OR10C1Q96KK4 312 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 TAF9BQ9HBM6 251 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 KIF25Q9UIL4 384 aa22.24■■□□□ 1.15
LDB1-202ENST00000425280 ICE1Q9Y2F5 2266 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 IGKV1D-17A0A075B6S4 117 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 SNTB1Q13884 538 aaKnown RBP22.23■■□□□ 1.15
LDB1-202ENST00000425280 NCMAPQ5T1S8 102 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 ZNF818PQ6ZRF7 136 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 PRR18Q8N4B5 295 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 SUCNR1Q9BXA5 334 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 SHARPINQ9H0F6 387 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 GCM1Q9NP62 436 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 DNAJB11Q9UBS4 358 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 OR2W1Q9Y3N9 320 aa22.23■■□□□ 1.15
LDB1-202ENST00000425280 NKX2-6A6NCS4 301 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 M0R233 179 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 RPA2P15927 270 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 TNFSF4P23510 183 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 TMEM65Q6PI78 240 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 ZNF546Q86UE3 836 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 LDLRAD3Q86YD5 345 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 FAM185AQ8N0U4 392 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 OR8H1Q8NGG4 311 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 UBALD1Q8TB05 177 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 RNASE6Q93091 150 aaKnown RBP22.22■■□□□ 1.15
LDB1-202ENST00000425280 IGHV3OR15-7A0A075B7D8 119 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 MED19A0JLT2 244 aaPredicted RBP22.22■■□□□ 1.15
LDB1-202ENST00000425280 MPPED1O15442 326 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 TMUB2Q71RG4 321 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 ESRP2Q9H6T0 727 aaKnown RBP22.22■■□□□ 1.15
LDB1-202ENST00000425280 SEBOXQ9HB31 216 aaPredicted RBP22.22■■□□□ 1.15
LDB1-202ENST00000425280 COQ3Q9NZJ6 369 aa22.22■■□□□ 1.15
LDB1-202ENST00000425280 SHISA9B4DS77 424 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 GPR31O00270 319 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 C4BPBP20851 252 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 RND3P61587 244 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 TEX261Q6UWH6 196 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 ZNF767PQ75MW2 155 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 C2orf50Q96LR7 162 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 CCL28Q9NRJ3 127 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 U3KQ87 197 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 ZNF737O75373 536 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 PSMB6P28072 239 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 DMRTC2Q8IXT2 367 aaPredicted RBP22.21■■□□□ 1.15
LDB1-202ENST00000425280 LILRB4Q8NHJ6 448 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 GLYATL2Q8WU03 294 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 PLPPR2Q96GM1 343 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 MFFQ9GZY8 342 aa22.21■■□□□ 1.15
LDB1-202ENST00000425280 HSD17B6O14756 317 aa22.2■■□□□ 1.14
LDB1-202ENST00000425280 S100A11P31949 105 aa22.2■■□□□ 1.14
LDB1-202ENST00000425280 LIAT1Q6ZQX7 453 aa22.2■■□□□ 1.14
LDB1-202ENST00000425280 MSI2Q96DH6 328 aaKnown RBP22.2■■□□□ 1.14
LDB1-202ENST00000425280 KCNIP1Q9NZI2 227 aa22.2■■□□□ 1.14
LDB1-202ENST00000425280 RNF7Q9UBF6 113 aa22.2■■□□□ 1.14
LDB1-202ENST00000425280 ERRFI1Q9UJM3 462 aaPredicted RBP22.2■■□□□ 1.14
LDB1-202ENST00000425280 PHF1O43189 567 aaPredicted RBP22.19■■□□□ 1.14
LDB1-202ENST00000425280 GRNP28799 593 aaKnown RBP22.19■■□□□ 1.14
LDB1-202ENST00000425280 GABRA2P47869 451 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 CDSNQ15517 529 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 KRBOX4Q5JUW0 171 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 TBC1D26Q86UD7 250 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 SLC7A5P1Q8MH63 180 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 LRTM2Q8N967 370 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 TP53RKQ96S44 253 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 VRK1Q99986 396 aaPredicted RBP22.19■■□□□ 1.14
LDB1-202ENST00000425280 TNFSF18Q9UNG2 199 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 TMEM8BA6NDV4 472 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 GLIPR1P48060 266 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 TESK1Q15569 626 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 GGNBP1Q5YKI7 109 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 LINC01560Q8TB33 94 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 THAP6Q8TBB0 222 aa22.19■■□□□ 1.14
LDB1-202ENST00000425280 C3orf85A0A1B0GTC6 90 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 OOEPA6NGQ2 149 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 C12orf77C9JDV5 145 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 ADH4P08319 380 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 CD80P33681 288 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 PAX5Q02548 391 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 IL15RAQ13261 267 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 NDUFA5Q16718 116 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 FAM201AQ5SY85 155 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 ZNF680Q8NEM1 530 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 Q8TCH9 128 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 ERGIC1Q969X5 290 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 ARL6Q9H0F7 186 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 MBD2Q9UBB5 411 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 C17orf100A8MU93 164 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 HSPA12AO43301 675 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 HEXAP06865 529 aa22.18■■□□□ 1.14
LDB1-202ENST00000425280 TPRX1Q8N7U7 411 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms