RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 TNFRSF14Q92956 283 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 S100A16Q96FQ6 103 aaKnown RBP13.92□□□□□ -0.18
FOXN4-203ENST00000423960 ABCG5Q9H222 651 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 HEXA-AS1Q9H8Q6 139 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
FOXN4-203ENST00000423960 DIABLOQ9NR28 239 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 CALYQ9NYX4 217 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 NUP50Q9UKX7 468 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 KCNK7Q9Y2U2 307 aa13.92□□□□□ -0.18
FOXN4-203ENST00000423960 FBN1P35555 2871 aaKnown RBP13.92□□□□□ -0.18
FOXN4-203ENST00000423960 A0A075B6Q4 140 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 IGHV3OR16-10A0A075B7F0 116 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 A0A0A6YYH2 397 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 CENPVL3A0A0U1RRI6 287 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 DPPA5A6NC42 116 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 A6NJ64 397 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 IGHV1-8P0DP01 117 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 IGHV4-38-2P0DP08 117 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 SRD5A1P18405 259 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 CDK2P24941 298 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 C6orf183Q5T699 404 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 OLFML2AQ68BL7 652 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 HEPN1Q6WQI6 88 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 ZNF782Q6ZMW2 699 aaPredicted RBP13.91□□□□□ -0.18
FOXN4-203ENST00000423960 CMTM3Q96MX0 182 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
FOXN4-203ENST00000423960 LINC00574Q9H8X3 128 aa13.91□□□□□ -0.18
FOXN4-203ENST00000423960 ZMAT3Q9HA38 289 aaKnown RBP13.91□□□□□ -0.18
FOXN4-203ENST00000423960 CCDC59Q9P031 241 aaKnown RBP13.91□□□□□ -0.18
FOXN4-203ENST00000423960 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 SERPINE3A8MV23 424 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 RNASEK-C17orf49H0YIS7 233 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 MFNGO00587 321 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 ORC5O43913 435 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 MMP23AO75900 390 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 CLPXO76031 633 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 NAPSAO96009 420 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 IFNA2P01563 188 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 CD3GP09693 182 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 FAM157CP0CG43 387 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 RCC1P18754 421 aaPredicted RBP13.9□□□□□ -0.18
FOXN4-203ENST00000423960 OMGP23515 440 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 UBE2E1P51965 193 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 BPIFB3P59826 476 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 MRPS15P82914 257 aaKnown RBP13.9□□□□□ -0.18
FOXN4-203ENST00000423960 PRAMEF5Q5TYX0 476 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 TRAT1Q6PIZ9 186 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 PDZD9Q8IXQ8 264 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 RFESDQ8TAC1 157 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 ARL11Q969Q4 196 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 DGCR14Q96DF8 476 aaKnown RBP13.9□□□□□ -0.18
FOXN4-203ENST00000423960 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.18
FOXN4-203ENST00000423960 MBNL3Q9NUK0 354 aaKnown RBP13.9□□□□□ -0.18
FOXN4-203ENST00000423960 KCNIP1Q9NZI2 227 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 SESN1Q9Y6P5 492 aa13.9□□□□□ -0.18
FOXN4-203ENST00000423960 CUBNO60494 3623 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 TRAV18A0A075B6X5 111 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 TRBV6-6A0A0A6YYG2 114 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 IGHV1-69DA0A0B4J2H0 117 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 POM121CA8CG34 1229 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 NPIPB11E5RHQ5 1161 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 HPGDSO60760 199 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 IGHV1-69P01742 117 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 GSTP1P09211 210 aaKnown RBP13.89□□□□□ -0.19
FOXN4-203ENST00000423960 SSTR5P35346 364 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 GUCA2AQ02747 115 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 KLRD1Q13241 179 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 ZNF260Q3ZCT1 412 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 OR52W1Q6IF63 320 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 HCP5Q6MZN7 132 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 ZNF880Q6PDB4 577 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 OR13D1Q8NGV5 346 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 SETD6Q8TBK2 473 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 RAB9BQ9NP90 201 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 C12orf4Q9NQ89 552 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.89□□□□□ -0.19
FOXN4-203ENST00000423960 IDI2-AS1Q9NZ38 188 aa13.89□□□□□ -0.19
FOXN4-203ENST00000423960 ATRQ13535 2644 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 C12orf77C9JDV5 145 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 SPINT2O43291 252 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 XRCC3O43542 346 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 APOA1P02647 267 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 COX7A1P24310 79 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 FPR2P25090 351 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 TALDO1P37837 337 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 GDNFP39905 211 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 SCGB2A2Q13296 93 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 ARFRP1Q13795 201 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 HACD4Q5VWC8 232 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 ZNF554Q86TJ5 538 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 PNKDQ8N490 385 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 SUCNR1Q9BXA5 334 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 MS4A7Q9GZW8 240 aaPredicted RBP13.88□□□□□ -0.19
FOXN4-203ENST00000423960 TMEM133Q9H2Q1 129 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 TAF9BQ9HBM6 251 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 ZNF69Q9UC07 566 aa13.88□□□□□ -0.19
FOXN4-203ENST00000423960 ELF5Q9UKW6 265 aaPredicted RBP13.88□□□□□ -0.19
FOXN4-203ENST00000423960 A0A1W2PRD5 423 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms