RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DAPP51397 102 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 GABPB1Q06547 395 aaPredicted RBP12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 C12orf73Q69YU5 71 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 LYPD6Q86Y78 171 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 AQP12AQ8IXF9 295 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 OR2G2Q8NGZ5 317 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 PLPPR1Q8TBJ4 325 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 FAM107BQ9H098 131 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 NEK6Q9HC98 313 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 TPSG1Q9NRR2 321 aa12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 ZNF107Q9UII5 783 aaPredicted RBP12.92□□□□□ -0.34
CHCHD3-202ENST00000423635 TMEM225BP0DP42 221 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 VHLP40337 213 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 SRSF7Q16629 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 OR13C9Q8NGT0 318 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 IL4I1Q96RQ9 567 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 FAM118AQ9NWS6 357 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 ZNF446Q9NWS9 450 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 FRRS1LQ9P0K9 344 aa12.91□□□□□ -0.34
CHCHD3-202ENST00000423635 TRAV39A0A0B4J263 110 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 ZAR1LA6NP61 321 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 LINC01619G3V211 115 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 G3V318 75 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 FAM107AO95990 144 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 OR8U9P0C7N5 309 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 MYF6P23409 242 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 IL3RAP26951 378 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 SLURP1P55000 103 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 ZNF85Q03923 595 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 IL13RA2Q14627 380 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 KISS1Q15726 138 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 Q3ZCU0 254 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 FDX2Q6P4F2 183 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 UTP4Q969X6 686 aaKnown RBP12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 ZCCHC4Q9H5U6 513 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 GNG8Q9UK08 70 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 WSB1Q9Y6I7 421 aa12.9□□□□□ -0.34
CHCHD3-202ENST00000423635 ALMS1Q8TCU4 4167 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 C15orf65H3BRN8 121 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 TXNL1O43396 289 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 DCTN3O75935 186 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 EPHA2P29317 976 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 ZNF137PP52743 207 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 FAM220AQ7Z4H9 259 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 MINDY2Q8NBR6 621 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 PXT1Q8NFP0 134 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 TOLLIPQ9H0E2 274 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 GFOD1Q9NXC2 390 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
CHCHD3-202ENST00000423635 CCR9P51686 369 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 NANOS3P60323 173 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 KCTD20Q7Z5Y7 419 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 SGPP2Q8IWX5 399 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 OR10AC1Q8NH08 325 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 IL17DQ8TAD2 202 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 RBMXL1Q96E39 390 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 NSL1Q96IY1 281 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 TRAV41A0A0B4J266 112 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 SDCBPO00560 298 aaPredicted RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 HSPA12AO43301 675 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 ORC5O43913 435 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 IFNA6P05013 189 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 TMED1Q13445 227 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 HAGHQ16775 308 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 ARL11Q969Q4 196 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 EME1Q96AY2 570 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 CCDC124Q96CT7 223 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 DPCDQ9BVM2 203 aaPredicted RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 MRPS28Q9Y2Q9 187 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-202ENST00000423635 FRAS1Q86XX4 4008 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 IGHV7-81A0A0B4J1V7 117 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 MITFO75030 526 aaPredicted RBP12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 FKBP6O75344 327 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 HLA-DRB1P01911 266 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 ATP6V1E1P36543 226 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 ZNF691Q5VV52 312 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 SUMF2Q8NBJ7 301 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
CHCHD3-202ENST00000423635 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 A0A087WW49 117 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 SLC31A2O15432 143 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 IGLV1-51P01701 117 aa12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
CHCHD3-202ENST00000423635 ZNF134P52741 427 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms