RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ZIK1Q3SY52 487 aaPredicted RBP6.32□□□□□ -1.4
VIM-202ENST00000421459 CXorf66Q5JRM2 361 aaPredicted RBP6.32□□□□□ -1.4
VIM-202ENST00000421459 CASC10Q5T4H9 136 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 C9orf66Q5T8R8 295 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 ASPHD1Q5U4P2 390 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 C1orf146Q5VVC0 180 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 KCTD20Q7Z5Y7 419 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 TGIF2LXQ8IUE1 241 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 COMMD1Q8N668 190 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 TMEM104Q8NE00 496 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 OR11H1Q8NG94 326 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 OR8U1Q8NH10 309 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 LGALS12Q96DT0 336 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 RITA1Q96K30 269 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 S1PR3Q99500 378 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 GABARAPL3Q9BY60 117 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 BARHL1Q9BZE3 327 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 FAM192AQ9GZU8 254 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 AP4S1Q9Y587 144 aa6.32□□□□□ -1.4
VIM-202ENST00000421459 A0A1W2PP11 408 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 G3V318 75 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 SDCBPO00560 298 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 GEMIN2O14893 280 aaKnown RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 DBTP11182 482 aaKnown RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 MYF6P23409 242 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 CNTFRP26992 372 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 SLC6A1P30531 599 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 GTF2A1P52655 376 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 ZNF134P52741 427 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 GNB1P62873 340 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 TMED1Q13445 227 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 FOXE3Q13461 319 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 DCTN2Q13561 401 aaKnown RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 KIAA0141Q14154 515 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 RSU1Q15404 277 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 ELP2Q6IA86 826 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 SERPINA12Q8IW75 414 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 C10orf67Q8IYJ2 551 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 PARP16Q8N5Y8 322 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 RNF152Q8N8N0 203 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 OR10V1Q8NGI7 309 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 OR5D14Q8NGL3 314 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 OR2T10Q8NGZ9 312 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 MUC7Q8TAX7 377 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 RTN4IP1Q8WWV3 396 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 RGP1Q92546 391 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 RFKQ969G6 155 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 ARL11Q969Q4 196 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 ST6GALNAC6Q969X2 333 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 KCTD7Q96MP8 289 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 GPER1Q99527 375 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 RASL11BQ9BPW5 248 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 ALG8Q9BVK2 526 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 DPCDQ9BVM2 203 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 ALX4Q9H161 411 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 RHOFQ9HBH0 211 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 AMBNQ9NP70 447 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 LIN7CQ9NUP9 197 aaKnown RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 TAS2R4Q9NYW5 299 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 ING4Q9UNL4 249 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 DHDHQ9UQ10 334 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 EXOGQ9Y2C4 368 aaKnown RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 ZNF256Q9Y2P7 627 aaPredicted RBP6.31□□□□□ -1.4
VIM-202ENST00000421459 WSB1Q9Y6I7 421 aa6.31□□□□□ -1.4
VIM-202ENST00000421459 MPZL2O60487 215 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 OR7C1O76099 320 aaPredicted RBP6.3□□□□□ -1.4
VIM-202ENST00000421459 ATP6V1G2O95670 118 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 MOSP00540 346 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 IGHG4P01861 327 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 ELANEP08246 267 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 VHLP40337 213 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 FHL3Q13643 280 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 GALEQ14376 348 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 IL13RA2Q14627 380 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 CT45A1Q5HYN5 189 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 ZFAND6Q6FIF0 208 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 XAF1Q6GPH4 301 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 IZUMO1Q8IYV9 350 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 PRR18Q8N4B5 295 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 ACBD7Q8N6N7 88 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 Q8NFD4 153 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 PXT1Q8NFP0 134 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 OR1N2Q8NGR9 330 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 OR5AK2Q8NH90 309 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 CT45A3Q8NHU0 189 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 CASTOR1Q8WTX7 329 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 C4orf3Q8WVX3 66 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 TSEN15Q8WW01 171 aaKnown RBP6.3□□□□□ -1.4
VIM-202ENST00000421459 RCHY1Q96PM5 261 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 NCOR1P1Q9H4R4 102 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 FAM118AQ9NWS6 357 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 IMPAD1Q9NX62 359 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 ZMAT5Q9UDW3 170 aaKnown RBP6.3□□□□□ -1.4
VIM-202ENST00000421459 ST3GAL6Q9Y274 331 aa6.3□□□□□ -1.4
VIM-202ENST00000421459 KIAA2026Q5HYC2 2103 aa6.29□□□□□ -1.4
VIM-202ENST00000421459 C12orf77C9JDV5 145 aa6.29□□□□□ -1.4
VIM-202ENST00000421459 H3BNX3 289 aa6.29□□□□□ -1.4
VIM-202ENST00000421459 I3L521 148 aa6.29□□□□□ -1.4
VIM-202ENST00000421459 MT-ND4P03905 459 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms