RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CSTAP01040 98 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 IFNA21P01568 189 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 IGHMP01871 453 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 PCCBP05166 539 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 GLAP06280 429 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 HOXC4P09017 264 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 CISD3P0C7P0 127 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ASAH2BP0C7U1 165 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ZNF44P15621 663 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 MUC1P15941 1255 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 GATA1P15976 413 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 RAB5AP20339 215 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 LAP3P28838 519 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 HSD11B1P28845 292 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 CRABP1P29762 137 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 GABRA3P34903 492 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 KIR3DL2P43630 455 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 DNASE1L1P49184 302 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 RIDAP52758 137 aaKnown RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 EFNB2P52799 333 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 UCP2P55851 309 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 RAB38P57729 211 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TAS2R46P59540 309 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ACTR1AP61163 376 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SRPXP78539 464 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 BTG2P78543 158 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 C17orf67Q0P5P2 114 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 FABP9Q0Z7S8 132 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 PPP1R1AQ13522 171 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC17A1Q14916 467 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ATXN7L3Q14CW9 347 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 SGCAQ16586 387 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ZNF239Q16600 458 aaKnown RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 TRMT12Q53H54 448 aaKnown RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 GLYATL3Q5SZD4 288 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 HIST2H3PS2Q5TEC6 136 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TMEM184AQ6ZMB5 413 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 Q7L0L9 218 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 KCTD9Q7L273 389 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC16A13Q7RTY0 426 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 VN1R4Q7Z5H5 301 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TRAPPC6BQ86SZ2 158 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR4N5Q8IXE1 308 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 LRRC18Q8N456 261 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC22A24Q8N4F4 322 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 LRRC75AQ8NAA5 344 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 UBAC2Q8NBM4 344 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR9K2Q8NGE7 335 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR56B1Q8NGI3 324 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR51L1Q8NGJ5 315 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR4A4PQ8NGN8 299 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 OR6N2Q8NGY6 317 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TERB2Q8NHR7 220 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 NUBPLQ8TB37 319 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 LCN9Q8WX39 176 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 C11orf52Q96A22 123 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 RASD2Q96D21 266 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 C14orf79Q96F83 325 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC25A44Q96H78 314 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 SEC22AQ96IW7 307 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ALKBH3Q96Q83 286 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 PFDN5Q99471 154 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC6A7Q99884 636 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TTTY10Q9BZA0 68 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SELENOIQ9C0D9 397 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC5A7Q9GZV3 580 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 CHST6Q9GZX3 395 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TOLLIPQ9H0E2 274 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ZBP1Q9H171 429 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC26A1Q9H2B4 701 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 C8orf33Q9H7E9 229 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 ZNF665Q9H7R5 613 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 MOB1AQ9H8S9 216 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 PLEKHA3Q9HB20 300 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 KCNJ16Q9NPI9 418 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 RPS10P5Q9NQ39 176 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SIRT7Q9NRC8 400 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 CYTL1Q9NRR1 136 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 C1orf123Q9NWV4 160 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 DEC1Q9P2X7 70 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 GHRLQ9UBU3 117 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 PRODH2Q9UF12 536 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 PISDQ9UG56 409 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC23A2Q9UGH3 650 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 ZNF230Q9UIE0 474 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 SH3BGRL2Q9UJC5 107 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 HHLA2Q9UM44 414 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 SLC17A4Q9Y2C5 497 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 RPH3AQ9Y2J0 694 aaPredicted RBP2.13□□□□□ -2.07
VPS41-206ENST00000418457 STARD10Q9Y365 291 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 FLVCR1Q9Y5Y0 555 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 TMEM131Q92545 1883 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 XIRP2A4UGR9 3374 aa2.13□□□□□ -2.07
VPS41-206ENST00000418457 COL5A1P20908 1838 aaPredicted RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 TRPM6Q9BX84 2022 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 IGKV1D-42A0A075B6H8 117 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 TRAV36DV7A0A075B6V5 113 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 A0A0A6YYC8 382 aaPredicted RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 NPIPA5A0A0B4J1W7 369 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 A0A0J9YY10 115 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms