RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 Q6ZSR3 168 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 WDR5BQ86VZ2 330 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 MCEMP1Q8IX19 187 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 CMTM1Q8IZ96 169 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 DEFB127Q9H1M4 99 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 IFT22Q9H7X7 185 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 PLEKHF2Q9H8W4 249 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 ZMAT5Q9UDW3 170 aaKnown RBP10.17□□□□□ -0.78
LIMK1-202ENST00000418310 ATPIF1Q9UII2 106 aa10.17□□□□□ -0.78
LIMK1-202ENST00000418310 CD300LBA8K4G0 201 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 PRSS44E7EML9 344 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 SYNGR4O95473 234 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 DUSP3P51452 185 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-202ENST00000418310 ELLP55199 621 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-202ENST00000418310 FOXO1Q12778 655 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 EIF3IQ13347 325 aaKnown RBP10.16□□□□□ -0.78
LIMK1-202ENST00000418310 ATP1A1-AS1Q5TC04 95 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 LRTM2Q8N967 370 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 OR1J1Q8NGS3 322 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 RAB39BQ96DA2 213 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 OR14J1Q9UGF5 321 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 RNF150Q9ULK6 438 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 USF3Q68DE3 2245 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 H3BQ15 152 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 GFRA1P56159 465 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 FGF12P61328 243 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 ZNF674Q2M3X9 581 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 MPV17LQ2QL34 196 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 LYPD6BQ8NI32 183 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 ARV1Q9H2C2 271 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 VSIRQ9H7M9 311 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 FOXJ2Q9P0K8 574 aa10.16□□□□□ -0.78
LIMK1-202ENST00000418310 BOKQ9UMX3 212 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-202ENST00000418310 PQLC2LA1A4F0 135 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 TUSC2O75896 110 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 ERVS71-1P61550 626 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 RPL23AP62750 156 aaKnown RBP10.15□□□□□ -0.78
LIMK1-202ENST00000418310 ZNF561Q8N587 486 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 CCDC54Q8NEL0 328 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 OR2M7Q8NG81 312 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 APH1AQ96BI3 265 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 PLPPR2Q96GM1 343 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 SPIN2AQ99865 258 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 SPIN2BQ9BPZ2 258 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
LIMK1-202ENST00000418310 CACNG5Q9UF02 275 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.78
LIMK1-202ENST00000418310 PGLYRP1O75594 196 aaPredicted RBP10.15□□□□□ -0.78
LIMK1-202ENST00000418310 NDUFA6P56556 154 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 RAB11AP62491 216 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 SPSB3Q6PJ21 355 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 Q6ZRM9 215 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 ODF3L1Q8IXM7 274 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 OR10J5Q8NHC4 309 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 LYRM2Q9NU23 88 aaPredicted RBP10.15□□□□□ -0.78
LIMK1-202ENST00000418310 SPTBN2O15020 2390 aa10.15□□□□□ -0.78
LIMK1-202ENST00000418310 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 C5orf52A6NGY3 159 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 NEURL1O76050 574 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 CDS2O95674 445 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 CER1O95813 267 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 PLP2Q04941 152 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 KIAA0141Q14154 515 aaPredicted RBP10.15□□□□□ -0.79
LIMK1-202ENST00000418310 OR1C1Q15619 314 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 CLEC12BQ2HXU8 276 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 RIPPLY2Q5TAB7 128 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 GPR146Q96CH1 333 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 SLC25A31Q9H0C2 315 aa10.15□□□□□ -0.79
LIMK1-202ENST00000418310 IFNA4P05014 189 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 SERPINA7P05543 415 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 UCP3P55916 312 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 CEACAM21Q3KPI0 293 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 OR8G2PQ6IF36 304 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 GCNT2Q8N0V5 402 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
LIMK1-202ENST00000418310 PRDM14Q9GZV8 571 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 WSB1Q9Y6I7 421 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 CADP27708 2225 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 ANKRD30BLA7E2S9 258 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 GRPP07492 148 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 CELA3BP08861 270 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 OR8U8P0C7N1 319 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 VDAC1P21796 283 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 DLK1P80370 383 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 HMGN3Q15651 99 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 SPINK9Q5DT21 86 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 SPANXN5Q5MJ07 72 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 ZNF429Q86V71 674 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 ZNF808Q8N4W9 903 aaPredicted RBP10.14□□□□□ -0.79
LIMK1-202ENST00000418310 ZNF665Q9H7R5 613 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 IL36GQ9NZH8 169 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 TAAR3PQ9P1P4 343 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 TRAPPC2LQ9UL33 140 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 TTC28Q96AY4 2481 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 TGIF2-C20orf24A0A0A6YYL0 155 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 TRAV24A0A0B4J272 114 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 DNPH1O43598 174 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 PITX3O75364 302 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms