RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MAFIPQ8WZ33 124 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 WDFY2Q96P53 400 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 ST6GALNAC5Q9BVH7 336 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 MIXL1Q9H2W2 232 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 C7orf69Q9H7B7 122 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRIM48-201ENST00000417545 INSIG2Q9Y5U4 225 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 KPTNQ9Y664 436 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 AUP1Q9Y679 476 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 PDZD2O15018 2839 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 FOXI3A8MTJ6 420 aaPredicted RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 SULT1C2O00338 296 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 SDCBPO00560 298 aaPredicted RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 CD5LO43866 347 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 ORC5O43913 435 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 FCER2P06734 321 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 LPLP06858 475 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 PTHLHP12272 177 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 FOSL1P15407 271 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 SSTR5P35346 364 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 OR3A3P47888 321 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 GUCA2AQ02747 115 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 CHRFAM7AQ494W8 412 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 PRAMEF5Q5TYX0 476 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 NCR3LG1Q68D85 454 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 CLEC9AQ6UXN8 241 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF782Q6ZMW2 699 aaPredicted RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 RTN4RL2Q86UN3 420 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 OR6Q1Q8NGQ2 317 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 OR13D1Q8NGV5 346 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 RFESDQ8TAC1 157 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 UBALD1Q8TB05 177 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 GCDHQ92947 438 aaPredicted RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 GALMQ96C23 342 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 C1orf159Q96HA4 380 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 DMRTB1Q96MA1 342 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 GINS4Q9BRT9 223 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 NCOR1P1Q9H4R4 102 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 METTL8Q9H825 291 aaKnown RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 HEXA-AS1Q9H8Q6 139 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 SCPEP1Q9HB40 452 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 TAF9BQ9HBM6 251 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 SIRT7Q9NRC8 400 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 MMP26Q9NRE1 261 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 IDI2-AS1Q9NZ38 188 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 GNG12Q9UBI6 72 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 OPN4Q9UHM6 478 aa6.98□□□□□ -1.29
TRIM48-201ENST00000417545 ELF5Q9UKW6 265 aaPredicted RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 POLR3KQ9Y2Y1 108 aaPredicted RBP6.98□□□□□ -1.29
TRIM48-201ENST00000417545 DSCAML1Q8TD84 2053 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 KBTBD11-OT1A0A1B0GTJ5 212 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 POM121CA8CG34 1229 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 A8MV72 311 aaPredicted RBP6.97□□□□□ -1.29
TRIM48-201ENST00000417545 TRDCB7Z8K6 153 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 C12orf77C9JDV5 145 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 GABARAPH6UMI1 98 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 TOR1AO14656 332 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 BET1O15155 118 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 FCN3O75636 299 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 RBBP9O75884 186 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 RGS11O94810 467 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 TPPPO94811 219 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 NAPSAO96009 420 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 HBZP02008 142 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 RCC1P18754 421 aaPredicted RBP6.97□□□□□ -1.29
TRIM48-201ENST00000417545 OMGP23515 440 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 COX7A1P24310 79 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 RCVRNP35243 200 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 SRP14P37108 136 aaKnown RBP6.97□□□□□ -1.29
TRIM48-201ENST00000417545 LGALS4P56470 323 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 PAX5Q02548 391 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 TMEM30BQ3MIR4 351 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 GPR157Q5UAW9 335 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 TRIQKQ629K1 86 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 VMO1Q7Z5L0 202 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 LY6G5BQ8NDX9 201 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 BEST4Q8NFU0 473 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 CORO2AQ92828 525 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 LHX4Q969G2 390 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 OCSTAMPQ9BR26 566 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 SUCNR1Q9BXA5 334 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 WDR12Q9GZL7 423 aaKnown RBP6.97□□□□□ -1.29
TRIM48-201ENST00000417545 Q9N2K0 584 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF230Q9UIE0 474 aaPredicted RBP6.97□□□□□ -1.29
TRIM48-201ENST00000417545 KCNK7Q9Y2U2 307 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 RBM7Q9Y580 266 aaKnown RBP6.97□□□□□ -1.29
TRIM48-201ENST00000417545 SESN1Q9Y6P5 492 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 CSMD2Q7Z408 3487 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
TRIM48-201ENST00000417545 TRBV6-6A0A0A6YYG2 114 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV3-43A0A0B4J1X8 118 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 TRAV40A0A0B4J280 105 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 FAM172BPA6NC97 362 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 FABP7O15540 132 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 HLA-DQB1P01920 261 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 RBP4P02753 201 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 MELTFP08582 738 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 GSTT2BP0CG30 244 aa6.96□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV1-8P0DP01 117 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms