RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SERPINA7P05543 415 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 CLRN1P58418 232 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 CEBPEQ15744 281 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 CD226Q15762 336 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 SLC18B1Q6NT16 456 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 DPY19L4Q7Z388 723 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 OR5AU1Q8NGC0 362 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 FLVCR1-AS1Q8TAF5 88 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 SAP25Q8TEE9 199 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 ZNF501Q96CX3 271 aaPredicted RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 RTBDNQ9BSG5 229 aaPredicted RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 LOC105371242A0A075B767 164 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 IGHV2OR16-5A0A0B4J2B6 119 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 A0A0B4J2E0 115 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 A0A1B0GX12 115 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 SMPD2O60906 423 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 MMP9P14780 707 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 ZNF74Q16587 644 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 SLC22A6Q4U2R8 563 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 ABCA11PQ4W5N1 156 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 LINC01590Q5TEZ4 76 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 WDR25Q64LD2 544 aaPredicted RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 DNM1P34Q6PK57 102 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 SLC38A9Q8NBW4 561 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 FAM216AQ8WUB2 273 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 FAM71F1Q96KD3 344 aaPredicted RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 RYDENQ9NUL5 291 aaKnown RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 NXT1Q9UKK6 140 aaKnown RBP6.82□□□□□ -1.32
SIK3-203ENST00000415541 B3GALT1Q9Y5Z6 326 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 PLXND1Q9Y4D7 1925 aa6.82□□□□□ -1.32
SIK3-203ENST00000415541 A0A087WV48 116 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 PRR32B1ATL7 298 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 NPIPA3F8WFD2 350 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 XRCC2O43543 280 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 LYPD3O95274 346 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 IGKV1D-16P01601 117 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 HPNP05981 417 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 BCL2P10415 239 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 WDR5BQ86VZ2 330 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SLC22A24Q8N4F4 322 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 OR4D6Q8NGJ1 314 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 ABHD3Q8WU67 409 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 EMC6Q9BV81 110 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SF3B5Q9BWJ5 86 aaKnown RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 AKIRIN1Q9H9L7 192 aaPredicted RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 KLHDC2Q9Y2U9 406 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 KIAA1549LQ6ZVL6 1849 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 A0A1B0GV72 72 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 ETV2O00321 342 aaPredicted RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 MMP23AO75900 390 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 TIAF1O95411 115 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 CNOT4O95628 575 aaKnown RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 IFNA5P01569 189 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 LCN2P80188 198 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 FOXF1Q12946 379 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SMIM21Q3B7S5 101 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 MORN2Q502X0 79 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SPATA45Q537H7 98 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 Q5PR19 223 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 C6orf15Q6UXA7 325 aaPredicted RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 OR51G1Q8NGK1 321 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 ZNRF4Q8WWF5 429 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 DDIT4LQ96D03 193 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 STARD4Q96DR4 205 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 ZNF845Q96IR2 970 aaPredicted RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 GPER1Q99527 375 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 DNAJB12Q9NXW2 375 aaKnown RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 NUP210Q8TEM1 1887 aaPredicted RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 FRG2CA6NGY1 282 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 CEBPZOSA8MTT3 80 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 TRAF3IP2O43734 574 aaPredicted RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 TNFSF15O95150 251 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 NDUFB8O95169 186 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 HLA-HP01893 362 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SSR4P51571 173 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 MTCP1P56278 107 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 MEP1BQ16820 701 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 FAM90A2PQ658T7 463 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 ZNF787Q6DD87 383 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 LGI3Q8N145 548 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 OR2M7Q8NG81 312 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 MRPL24Q96A35 216 aaKnown RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 FAM131CQ96AQ9 280 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SLAMF6Q96DU3 332 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 HSPB9Q9BQS6 159 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 SLC22A13Q9Y226 551 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
SIK3-203ENST00000415541 ROS1P08922 2347 aa6.81□□□□□ -1.32
SIK3-203ENST00000415541 DNAH14Q0VDD8 3507 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 HEATR5AQ86XA9 2040 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 C17orf51A8MQB3 221 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 ZNF878C9JN71 531 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 PITX3O75364 302 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 CCNOP22674 350 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 EWSR1Q01844 656 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms