RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ALOX12BO75342 701 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 DUS4LO95620 317 aaKnown RBP8.09□□□□□ -1.11
SNHG3-201ENST00000413987 ADAM8P78325 824 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 FAM3AP98173 230 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 HGFACQ04756 655 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 SRSF6Q13247 344 aaKnown RBP8.09□□□□□ -1.11
SNHG3-201ENST00000413987 RHEBQ15382 184 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 SCGB2B2Q4G0G5 96 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 MRPL2Q5T653 305 aaKnown RBP8.09□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF585AQ6P3V2 769 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 DPY19L2P2Q6ZN68 376 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 C16orf47Q6ZP98 133 aaPredicted RBP8.09□□□□□ -1.11
SNHG3-201ENST00000413987 ZAR1Q86SH2 424 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 TMEM251Q8N6I4 163 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 CTHRC1Q96CG8 243 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 RNF2Q99496 336 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 S100A13Q99584 98 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 KCNG2Q9UJ96 466 aa8.09□□□□□ -1.11
SNHG3-201ENST00000413987 IGKV3D-11A0A0A0MRZ8 115 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 C7orf77A4D0Y5 90 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 EEF1E1-BLOC1S5C9J1V9 151 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 STK17BO94768 372 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 CLPSP04118 112 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 SULT1A2P50226 295 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 EMDP50402 254 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 EFNB2P52799 333 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 TAS2R31P59538 309 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 PLA2G7Q13093 441 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 PPP1R1AQ13522 171 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF584Q8IVC4 421 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 WDFY1Q8IWB7 410 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 OR13C8Q8NGS7 320 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 OR6K6Q8NGW6 343 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 OR2AJ1Q8NGZ0 328 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 C16orf52Q8NHV5 167 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 C14orf144Q96I85 54 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 SYT4Q9H2B2 425 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 FKRPQ9H9S5 495 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 KCNE5Q9UJ90 142 aa8.09□□□□□ -1.12
SNHG3-201ENST00000413987 TRAV8-7A0A075B6U6 113 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 A0A0B4J2E0 115 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 A0A1B0GX12 115 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 VSTM2BA6NLU5 285 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 CEACAM4O75871 244 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 NDUFA7O95182 113 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 HKR1P10072 659 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 GABRA3P34903 492 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 IGLV3-21P80748 117 aaPredicted RBP8.08□□□□□ -1.12
SNHG3-201ENST00000413987 NSUN5P2Q63ZY6 315 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 DNM1P34Q6PK57 102 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF676Q8N7Q3 588 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF383Q8NA42 475 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 NPEPL1Q8NDH3 523 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 OR1J1Q8NGS3 322 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 OR2G2Q8NGZ5 317 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 TMEM106AQ96A25 262 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 RNF166Q96A37 237 aaPredicted RBP8.08□□□□□ -1.12
SNHG3-201ENST00000413987 AQP10Q96PS8 301 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 CDC42EP3Q9UKI2 254 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 VSIG4Q9Y279 399 aa8.08□□□□□ -1.12
SNHG3-201ENST00000413987 FAM157AC9JC47 383 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 DBHP09172 617 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 RPL4P36578 427 aaKnown RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 PKIAP61925 76 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 PSG6Q00889 435 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 FHL1Q13642 323 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 AWAT1Q58HT5 328 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 RNASE10Q5GAN6 216 aaKnown RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 PYY3Q5JQD4 70 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 DCAF12Q5T6F0 453 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 PRSS54Q6PEW0 395 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF627Q7L945 461 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 PRR22Q8IZ63 422 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF614Q8N883 585 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 POC1AQ8NBT0 407 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ASB17Q8WXJ9 295 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 Q96M85 177 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF587Q96SQ5 575 aaPredicted RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 SLC6A7Q99884 636 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 CHST5Q9GZS9 411 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 SLC2A9Q9NRM0 540 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 FARSAQ9Y285 508 aaKnown RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 V9GYY9 64 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 OR4C45A6NMZ5 311 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 C17orf51A8MQB3 221 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ADAM10O14672 748 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 IGKV1D-16P01601 117 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 CELA2AP08217 269 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 HIST1H1BP16401 226 aaKnown RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 FSTP19883 344 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 CSNK1A1P48729 337 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 NOVA1P51513 510 aaKnown RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 SLC25A1P53007 311 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 CRYBA4P53673 196 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 RPL19P84098 196 aaKnown RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 HAGHQ16775 308 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms