RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CD1BP29016 333 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 VHLP40337 213 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 ALKBH1Q13686 389 aaKnown RBP9.47□□□□□ -0.89
LIMS2-210ENST00000413578 ZSCAN26Q16670 478 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 DNAL1Q4LDG9 190 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 ZNF691Q5VV52 312 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 FAM53AQ6NSI3 398 aaPredicted RBP9.47□□□□□ -0.89
LIMS2-210ENST00000413578 ASCL4Q6XD76 172 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 MOB3BQ86TA1 216 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 OR11H1Q8NG94 326 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 OR52M1Q8NGK5 317 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 IFT22Q9H7X7 185 aa9.47□□□□□ -0.89
LIMS2-210ENST00000413578 LCE6AA0A183 80 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.9
LIMS2-210ENST00000413578 GABRPO00591 440 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 MOSP00540 346 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 HCKP08631 526 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF137PP52743 207 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 RUNX1Q01196 453 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 PIGYQ3MUY2 71 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 Q3ZCU0 254 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 NHLRC3Q5JS37 347 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 SLC25A30Q5SVS4 291 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 RTN4IP1Q8WWV3 396 aaPredicted RBP9.46□□□□□ -0.9
LIMS2-210ENST00000413578 RBMXL1Q96E39 390 aaKnown RBP9.46□□□□□ -0.9
LIMS2-210ENST00000413578 KCTD7Q96MP8 289 aa9.46□□□□□ -0.9
LIMS2-210ENST00000413578 NR1H4Q96RI1 486 aaPredicted RBP9.46□□□□□ -0.9
LIMS2-210ENST00000413578 GAR1Q9NY12 217 aaKnown RBP9.46□□□□□ -0.9
LIMS2-210ENST00000413578 DAPL1A0PJW8 107 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 GYG2O15488 501 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 GZMHP20718 246 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 SOX6P35712 828 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 F2RL1P55085 397 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 SERPINA12Q8IW75 414 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 SUMF2Q8NBJ7 301 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF439Q8NDP4 499 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 OR51A2Q8NGJ7 313 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 OR5D14Q8NGL3 314 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 OR10K1Q8NGX5 313 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 TRUB1Q8WWH5 349 aaKnown RBP9.45□□□□□ -0.9
LIMS2-210ENST00000413578 RNFT2Q96EX2 444 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 C4orf36Q96KX1 117 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 UBE2E2Q96LR5 201 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 DPCDQ9BVM2 203 aaPredicted RBP9.45□□□□□ -0.9
LIMS2-210ENST00000413578 KLK15Q9H2R5 256 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 RIBC2Q9H4K1 309 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 GFOD1Q9NXC2 390 aa9.45□□□□□ -0.9
LIMS2-210ENST00000413578 EXOGQ9Y2C4 368 aaKnown RBP9.45□□□□□ -0.9
LIMS2-210ENST00000413578 J3QLW9 94 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 OR8U8P0C7N1 319 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF19P17023 458 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 VDAC1P21796 283 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 FASP25445 335 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 SNRPGP62308 76 aaKnown RBP9.44□□□□□ -0.9
LIMS2-210ENST00000413578 LPCAT4Q643R3 524 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 SLC25A48Q6ZT89 311 aaKnown RBP9.44□□□□□ -0.9
LIMS2-210ENST00000413578 AMIGO2Q86SJ2 522 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF429Q86V71 674 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 SYS1Q8N2H4 156 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF491Q8N8L2 437 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 CHCHD6Q9BRQ6 235 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 FAM118AQ9NWS6 357 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 IL36GQ9NZH8 169 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 SORL1Q92673 2214 aa9.44□□□□□ -0.9
LIMS2-210ENST00000413578 TMEM30CPA0ZSE6 113 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 FAM90A10PA6NDY2 464 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 E9PI62 339 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 SDCBPO00560 298 aaPredicted RBP9.43□□□□□ -0.9
LIMS2-210ENST00000413578 SLC31A2O15432 143 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ORC5O43913 435 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 FRMD6-AS1P0C7T7 363 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 OR5H8P0DN80 308 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 LYL1P12980 280 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF134P52741 427 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 GNB1P62873 340 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF616Q08AN1 781 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 GALEQ14376 348 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ACBD7Q8N6N7 88 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 OR1N2Q8NGR9 330 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 UBALD1Q8TB05 177 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 RGP1Q92546 391 aaPredicted RBP9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ARL11Q969Q4 196 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 LGALS12Q96DT0 336 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 PDCD1LG2Q9BQ51 273 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ISG20L2Q9H9L3 353 aaKnown RBP9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ISYNA1Q9NPH2 558 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ZNF107Q9UII5 783 aaPredicted RBP9.43□□□□□ -0.9
LIMS2-210ENST00000413578 OAZ3Q9UMX2 235 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 DHDHQ9UQ10 334 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 ST3GAL6Q9Y274 331 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 AP4S1Q9Y587 144 aa9.43□□□□□ -0.9
LIMS2-210ENST00000413578 IGHV3-43A0A0B4J1X8 118 aa9.42□□□□□ -0.9
LIMS2-210ENST00000413578 TMEM212A6NML5 194 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms