RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 KCNE4Q8WWG9 221 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 GTF3AQ92664 365 aaKnown RBP15.1■□□□□ 0.01
SDCBP-202ENST00000413219 ALKBH3Q96Q83 286 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-202ENST00000413219 RIMS4Q9H426 269 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-202ENST00000413219 PITPNC1Q9UKF7 332 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 KIAA1549Q9HCM3 1950 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 BCL3P20749 454 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 B3GALT5-AS1P59052 145 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 RPS18P62269 152 aaKnown RBP15.1■□□□□ 0.01
SDCBP-202ENST00000413219 CCL7P80098 99 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 PMS2P11Q13670 270 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 COL19A1Q14993 1142 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 GUSBP11Q6P575 273 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 SCGB1C1Q8TD33 95 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 CA5BP1Q8WTZ4 195 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 CCDC74BQ96LY2 380 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 RPRMQ9NS64 109 aa15.1■□□□□ 0.01
SDCBP-202ENST00000413219 KIAA1324LA8MWY0 1029 aaPredicted RBP15.09■□□□□ 0.01
SDCBP-202ENST00000413219 TSTD3H0UI37 97 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 FABP4P15090 132 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 CARD18P57730 90 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 ZFP36L1Q07352 338 aaKnown RBP15.09■□□□□ 0.01
SDCBP-202ENST00000413219 GAMTQ14353 236 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 CEACAM16Q2WEN9 425 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 ABLIM2Q6H8Q1 611 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 COLCA1Q6ZS62 124 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 ZNF295-AS1Q8N0V1 137 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 FGFBP3Q8TAT2 258 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 GPR146Q96CH1 333 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 AKIRIN1Q9H9L7 192 aaPredicted RBP15.09■□□□□ 0.01
SDCBP-202ENST00000413219 CDH20Q9HBT6 801 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 EML6Q6ZMW3 1958 aa15.09■□□□□ 0.01
SDCBP-202ENST00000413219 IGKV1-6A0A0C4DH72 117 aa15.08■□□□□ 0.01
SDCBP-202ENST00000413219 CNOT4O95628 575 aaKnown RBP15.08■□□□□ 0.01
SDCBP-202ENST00000413219 LY86O95711 162 aa15.08■□□□□ 0.01
SDCBP-202ENST00000413219 MMP7P09237 267 aaPredicted RBP15.08■□□□□ 0.01
SDCBP-202ENST00000413219 SERF2P84101 59 aa15.08■□□□□ 0.01
SDCBP-202ENST00000413219 PDZD11Q5EBL8 140 aa15.08■□□□□ 0.01
SDCBP-202ENST00000413219 GPR35Q9HC97 309 aa15.08■□□□□ 0.01
SDCBP-202ENST00000413219 TRBV6-6A0A0A6YYG2 114 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 CCDC163A0A0D9SF12 145 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 G3V3Y1 287 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 COX6A1P12074 109 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 PAX1P15863 534 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 DDTP30046 118 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 SRD5A2P31213 254 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 MRGPRGQ86SM5 289 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 PACRGQ96M98 296 aaPredicted RBP15.08■□□□□ 0
SDCBP-202ENST00000413219 GPHA2Q96T91 129 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 DUSP23Q9BVJ7 150 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 PARD6GQ9BYG4 376 aaPredicted RBP15.08■□□□□ 0
SDCBP-202ENST00000413219 ZNF665Q9H7R5 613 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 VAX2Q9UIW0 290 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 CA14Q9ULX7 337 aa15.08■□□□□ 0
SDCBP-202ENST00000413219 A0A0G2JRQ6 117 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 SMCO3A2RU48 225 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 LRP5LA4QPB2 252 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 ZFP92A6NM28 416 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 ATXN7O15265 892 aaPredicted RBP15.07■□□□□ 0
SDCBP-202ENST00000413219 NXPH3O95157 252 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 IFNA1P01562 189 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 NRN1LQ496H8 165 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 GGNQ86UU5 652 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 LSM10Q969L4 123 aaKnown RBP15.07■□□□□ 0
SDCBP-202ENST00000413219 HIST1H2BLQ99880 126 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 CABLES2Q9BTV7 478 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 LRFN1Q9P244 771 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 FGF5P12034 268 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 ZNF726P1Q15940 193 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 PCSK4Q6UW60 755 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 SSX9Q7RTT3 188 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 C5orf24Q7Z6I8 188 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 LINC00596Q86U02 117 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 ZNF525Q8N782 197 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 AGMATQ9BSE5 352 aa15.07■□□□□ 0
SDCBP-202ENST00000413219 RYDENQ9NUL5 291 aaKnown RBP15.07■□□□□ 0
SDCBP-202ENST00000413219 SLC33A1O00400 549 aaPredicted RBP15.06■□□□□ 0
SDCBP-202ENST00000413219 DVL1O14640 695 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 SERPINE2P07093 398 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 UMODP07911 640 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 MLF1P58340 268 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 TMEM267Q0VDI3 215 aaPredicted RBP15.06■□□□□ 0
SDCBP-202ENST00000413219 PRDX4Q13162 271 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 RPS19BP1Q86WX3 136 aaKnown RBP15.06■□□□□ 0
SDCBP-202ENST00000413219 TMEM183AQ8IXX5 376 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 MKXQ8IYA7 352 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 BATF2Q8N1L9 274 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 OR10A7Q8NGE5 316 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 OR56B2PQ8NGI1 322 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 RNASEH2CQ8TDP1 164 aaKnown RBP15.06■□□□□ 0
SDCBP-202ENST00000413219 PINX1Q96BK5 328 aaKnown RBP15.06■□□□□ 0
SDCBP-202ENST00000413219 RHOVQ96L33 236 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 RSG1Q9BU20 258 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 REPIN1Q9BWE0 567 aaKnown RBP15.06■□□□□ 0
SDCBP-202ENST00000413219 SRD5A3Q9H8P0 318 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 OR14J1Q9UGF5 321 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 OR2W1Q9Y3N9 320 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 CEP192Q8TEP8 1941 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 ABCA7Q8IZY2 2146 aa15.06■□□□□ 0
SDCBP-202ENST00000413219 LY6G6EA0A0G2JKS1 128 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms