RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 OR51B6Q9H340 312 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 LRRC3CA6NJW4 275 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 DIRC3C9JPN6 131 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 TIGITQ495A1 244 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 C1QL2Q7Z5L3 287 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 EREGO14944 169 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 CBR3O75828 277 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 P04436 131 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 GZMBP10144 247 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 P2RY6Q15077 328 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 RAB35Q15286 201 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 OR4B1Q8NGF8 309 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 GPBAR1Q8TDU6 330 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 CCDC74BQ96LY2 380 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 APOA2P02652 100 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 C9orf135Q5VTT2 229 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 SLC24A4Q8NFF2 622 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 MRGPRX1Q96LB2 322 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 MTCH1Q9NZJ7 389 aa12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 PTRH2Q9Y3E5 179 aaKnown RBP12.09□□□□□ -0.47
CLTCL1-201ENST00000412649 CHRNB4P30926 498 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF738Q8NE65 137 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 Q96M66 194 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 DNAJC4Q9NNZ3 241 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 FOXJ2Q9P0K8 574 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 MRPS21P82921 87 aaKnown RBP12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 ATP6V1FQ16864 119 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 TPSD1Q9BZJ3 242 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 HELZP42694 1942 aaKnown RBP12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 G3V3Y1 287 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 SHHQ15465 462 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 C9orf40Q8IXQ3 194 aa12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 SELENOHQ8IZQ5 122 aaKnown RBP12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
CLTCL1-201ENST00000412649 A0A0U1RQV5 110 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 MARCH11A6NNE9 402 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 MRPL49Q13405 166 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 HLA-DRB5Q30154 266 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 TET1Q8NFU7 2136 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 TMEM170AQ8WVE7 144 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 PARLQ9H300 379 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 BCAT2O15382 392 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 CELA2BP08218 269 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 B4GALT1P15291 398 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 UCP3P55916 312 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 RELQ04864 619 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 EIF3IQ13347 325 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 SMAD4Q13485 552 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 OR4A16Q8NH70 328 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 CORO2AQ92828 525 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 SOX7Q9BT81 388 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 GPR27Q9NS67 375 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF391Q9UJN7 358 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 SPINK4O60575 86 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 LANCL2Q9NS86 450 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 TBX21Q9UL17 535 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 PDE6DO43924 150 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 PLAURQ03405 335 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 RTN4RL2Q86UN3 420 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF808Q8N4W9 903 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 ZCCHC14Q8WYQ9 949 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
CLTCL1-201ENST00000412649 IGHV5-51A0A0C4DH38 117 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 CRYAAP02489 173 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 TNFSF10P50591 281 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF774Q6NX45 483 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF721Q8TF20 911 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 C22orf15Q8WYQ4 148 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF253O75346 499 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 EDDM3BP56851 147 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 IGLV3-21P80748 117 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 STUMQ69YW2 141 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 RLN3Q8WXF3 142 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 TM2D1Q9BX74 207 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 OR2J1Q9GZK6 312 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 IGKV1D-43A0A0B4J1Z2 117 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 A6NNC1 897 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 TMEM250H0YL14 139 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 TSPAN2O60636 221 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 CTSBP07858 339 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 EN2P19622 333 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 CD38P28907 300 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 HOXC12P31275 282 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 RPEL1Q2QD12 228 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 SFTPA2Q8IWL1 248 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 OR1L6Q8NGR2 347 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 APH1AQ96BI3 265 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms