RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 RREB1Q92766 1687 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ARID1AO14497 2285 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 AVPR2P30518 371 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF77Q15935 545 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 IGSF11Q5DX21 431 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF502Q8TBZ5 544 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 LRRC29Q8WV35 223 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 VN1R1Q9GZP7 353 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 TMEM56-RWDD3S4R434 201 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 H3BP45 60 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 RAB29O14966 203 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 PPIHO43447 177 aaKnown RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ONECUT2O95948 504 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 SRFP11831 508 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 CKS2P33552 79 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 LCN2P80188 198 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ST3GAL2Q16842 350 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 OLIG3Q7RTU3 272 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 PHF7Q9BWX1 381 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 RNF122Q9H9V4 155 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 OPN4Q9UHM6 478 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 H0Y980 276 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 TCF21O43680 179 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 SLC25A20O43772 301 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 MGPP08493 103 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 RPS4XP62701 263 aaKnown RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 OR4X1Q8NH49 305 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 MAFAQ8NHW3 353 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 GEMIN7Q9H840 131 aaKnown RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 C20orf141Q9NUB4 165 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 TREM2Q9NZC2 230 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 C5P01031 1676 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 IFI6P09912 130 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ASAH2BP0C7U1 165 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 DAOP14920 347 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 CRYBB2P43320 205 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 UCNP55089 124 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 FOXF1Q12946 379 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 OR10AC1Q8NH08 325 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 MRPL24Q96A35 216 aaKnown RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 PRO1933Q9H354 126 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 USP54Q70EL1 1684 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 KIF13BQ9NQT8 1826 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 DDTP30046 118 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF117Q03924 483 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 SAPCD1Q5SSQ6 148 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 INO80CQ6PI98 192 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-203ENST00000412145 KLHDC9Q8NEP7 349 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 ASCL3Q9NQ33 180 aa6.52□□□□□ -1.37
PTPN3-203ENST00000412145 SLX4Q8IY92 1834 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 LINC01553A4QN01 128 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 OR11H12B2RN74 326 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 C1QTNF9BB2RNN3 333 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 J3QT63 122 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 ROM1Q03395 351 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 TMEM240Q5SV17 173 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 SIRT6Q8N6T7 355 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 OR13H1Q8NG92 308 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 OR11H1Q8NG94 326 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 OR11H2Q8NH07 326 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF519Q8TB69 540 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 CHST5Q9GZS9 411 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 ZFP64Q9NPA5 681 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 LTB4R2Q9NPC1 389 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 GPR27Q9NS67 375 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 CLEC5AQ9NY25 188 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 KNL1Q8NG31 2342 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 POM121BA6NF01 834 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 ZNF98A6NK75 572 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 HOXB1P14653 301 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-203ENST00000412145 IER3P46695 156 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 SMAD2Q15796 467 aaKnown RBP6.51□□□□□ -1.37
PTPN3-203ENST00000412145 VAX1Q5SQQ9 334 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 C17orf47Q8NEP4 570 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 MGST2Q99735 147 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 TUBD1Q9UJT1 453 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 PRRC2BQ5JSZ5 2229 aaKnown RBP6.51□□□□□ -1.37
PTPN3-203ENST00000412145 TRGV8A0A0C4DH27 118 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 PPYP01298 95 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 PRSS8Q16651 343 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 CT83Q5H943 113 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 DEFB108BQ8NET1 73 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 CA5BP1Q8WTZ4 195 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 RNF7Q9UBF6 113 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 A0A096LPE4 126 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 A0A1W2PPZ6 126 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 C21orf140B9A014 251 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 PI3P19957 117 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 KLRB1Q12918 225 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 SLC25A35Q3KQZ1 300 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 WDR38Q5JTN6 314 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 MDP1Q86V88 176 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 GPR35Q9HC97 309 aa6.51□□□□□ -1.37
PTPN3-203ENST00000412145 ELF5Q9UKW6 265 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms