RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CLVS1Q8IUQ0 354 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 FGFRL1Q8N441 504 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 MS4A15Q8N5U1 240 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ZNF283Q8N7M2 679 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ACBD4Q8NC06 268 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 SLC30A7Q8NEW0 376 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 STEAP2Q8NFT2 490 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 OR13C5Q8NGS8 318 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 OR10AC1Q8NH08 325 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 OR5AK2Q8NH90 309 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 SSC4DQ8WTU2 575 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 RAB2BQ8WUD1 216 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ITLN2Q8WWU7 325 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 GHSRQ92847 366 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 RPL3LQ92901 407 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 RNASE6Q93091 150 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 SPTSSAQ969W0 71 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 C12orf43Q96C57 262 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 DGCR14Q96DF8 476 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 BSCL2Q96G97 398 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 ZNF414Q96IQ9 312 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 CITED2Q99967 270 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 ACTR6Q9GZN1 396 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 FAM192AQ9GZU8 254 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 PBOV1Q9GZY1 135 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 OR51E2Q9H255 320 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 JPT2Q9H910 190 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 TXNL4BQ9NX01 149 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 OR52A1Q9UKL2 312 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 GPR132Q9UNW8 380 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 SLC22A13Q9Y226 551 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 POMT1Q9Y6A1 747 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 USP9XQ93008 2570 aaPredicted RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 IGHV2OR16-5A0A0B4J2B6 119 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 PNMA8CA0A1B0GUJ8 204 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 LOC107986453A0A1B0GWG9 222 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 LOC390937A0A1W2PQ73 354 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 C5orf49A4QMS7 147 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 NKX2-6A6NCS4 301 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 SRRM5B3KS81 715 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 ZNF879B4DU55 563 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 ZNF732B4DXR9 585 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 K7EQG2 157 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 SLC22A1O15245 554 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 SIGLEC5O15389 551 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 XRCC2O43543 280 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 AIREO43918 545 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 KALRNO60229 2985 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 SMPD2O60906 423 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 CLN5O75503 358 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 GATBO75879 557 aaKnown RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 DHRS3O75911 302 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 UCHL1P09936 223 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 UBCP0CG48 685 aaKnown RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 CD37P11049 281 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 CCL2P13500 99 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 FOLR2P14207 255 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 IGFBP3P17936 291 aaPredicted RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 CALCRP30988 508 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 APLNRP35414 380 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TGFBR1P36897 503 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 MAGEB1P43366 347 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 VBP1P61758 197 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 NCS1P62166 190 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 NAAAQ02083 359 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 CD300CQ08708 224 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 SPCS2Q15005 226 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 OR8B8Q15620 311 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TBC1D28Q2M2D7 210 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TIMM50Q3ZCQ8 353 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 Q499Y3 187 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 LRRC37A5PQ49AS3 106 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 ACSM3Q53FZ2 586 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TMEM255AQ5JRV8 349 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 GLYATL3Q5SZD4 288 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 BCL2L15Q5TBC7 163 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TMEM244Q5VVB8 128 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 XKRXQ6PP77 449 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 PAMR1Q6UXH9 720 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 RFPL4BQ6ZWI9 263 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 CROCCP3Q8IVE0 287 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 ZNF101Q8IZC7 436 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 RDH10Q8IZV5 341 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 OR52H1Q8NGJ2 320 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 OR51A4Q8NGJ6 313 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 C8orf46Q8TAG6 207 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 OR51E1Q8TCB6 317 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 GPR148Q8TDV2 347 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 PHYHIPQ92561 330 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TOMM40LQ969M1 308 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 ITFG2Q969R8 447 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TMEM203Q969S6 136 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 APOBEC3DQ96AK3 386 aaPredicted RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 SGK3Q96BR1 496 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 C10orf35Q96D05 121 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 WFIKKN1Q96NZ8 548 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 DERL3Q96Q80 235 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 KCNS3Q9BQ31 491 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 TMED9Q9BVK6 235 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms