RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PIGPP57054 158 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 FGL1Q08830 312 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 OR5T2Q8NGG2 359 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 PDCD10Q9BUL8 212 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 ZDHHC8Q9ULC8 765 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 WIPI2Q9Y4P8 454 aa11.85□□□□□ -0.51
LIMS2-206ENST00000409754 TEX13DA0A0J9YY54 714 aaPredicted RBP11.84□□□□□ -0.51
LIMS2-206ENST00000409754 RFPL4AA6NLU0 287 aa11.84□□□□□ -0.51
LIMS2-206ENST00000409754 NPIPB11E5RHQ5 1161 aa11.84□□□□□ -0.51
LIMS2-206ENST00000409754 RFPL4AL1F8VTS6 287 aa11.84□□□□□ -0.51
LIMS2-206ENST00000409754 CCSO14618 274 aa11.84□□□□□ -0.51
LIMS2-206ENST00000409754 BET1O15155 118 aa11.84□□□□□ -0.51
LIMS2-206ENST00000409754 RCC1P18754 421 aaPredicted RBP11.84□□□□□ -0.51
LIMS2-206ENST00000409754 RBMXP38159 391 aaKnown RBP11.84□□□□□ -0.51
LIMS2-206ENST00000409754 CEBPDP49716 269 aaPredicted RBP11.84□□□□□ -0.51
LIMS2-206ENST00000409754 HIST2H2BCQ6DN03 193 aa11.84□□□□□ -0.51
LIMS2-206ENST00000409754 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
LIMS2-206ENST00000409754 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 TMEM30CPA0ZSE6 113 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 PSPNO60542 156 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 CLDN14O95500 239 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 IGHV1-46P01743 117 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 TNFSF4P23510 183 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 SERPINF1P36955 418 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 ATXN7L3Q14CW9 347 aaPredicted RBP11.83□□□□□ -0.52
LIMS2-206ENST00000409754 GSG1LQ6UXU4 331 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 C5orf24Q7Z6I8 188 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 FAM185AQ8N0U4 392 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 CCDC71LQ8N9Z2 235 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 ITLN1Q8WWA0 313 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 RTN4IP1Q8WWV3 396 aaPredicted RBP11.83□□□□□ -0.52
LIMS2-206ENST00000409754 RNASE6Q93091 150 aaKnown RBP11.83□□□□□ -0.52
LIMS2-206ENST00000409754 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 NAA60Q9H7X0 242 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 COQ3Q9NZJ6 369 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 IL19Q9UHD0 177 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 TRAPPC2LQ9UL33 140 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 KCNIP3Q9Y2W7 256 aa11.83□□□□□ -0.52
LIMS2-206ENST00000409754 PKDREJQ9NTG1 2253 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 TRAV14DV4A0A0A6YYC5 116 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 EGR1P18146 543 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 C4BPBP20851 252 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 COL8A1P27658 744 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 CYCSP99999 105 aaKnown RBP11.82□□□□□ -0.52
LIMS2-206ENST00000409754 SORDQ00796 357 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 SLC35E4Q6ICL7 350 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 MOGAT3Q86VF5 341 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 ERGIC1Q969X5 290 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 NMES1Q9C002 83 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 ESRP2Q9H6T0 727 aaKnown RBP11.82□□□□□ -0.52
LIMS2-206ENST00000409754 COMMD9Q9P000 198 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 C5orf51A6NDU8 294 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 VSTM5A8MXK1 200 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
LIMS2-206ENST00000409754 LHBP01229 141 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 ADH4P08319 380 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 OR4A8P0C604 315 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 IGFBP2P18065 325 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 OR3A1P47881 315 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 RND3P61587 244 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 TNFAIP6P98066 277 aaPredicted RBP11.82□□□□□ -0.52
LIMS2-206ENST00000409754 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
LIMS2-206ENST00000409754 PAX5Q02548 391 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 COL10A1Q03692 680 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 HMGN3Q15651 99 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 SPRNQ5BIV9 151 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
LIMS2-206ENST00000409754 OR10J5Q8NHC4 309 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 CA5BP1Q8WTZ4 195 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 SUCNR1Q9BXA5 334 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 PRR13Q9NZ81 148 aa11.82□□□□□ -0.52
LIMS2-206ENST00000409754 FXYD6-FXYD2A0A087WZ82 144 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 L7N2F9 121 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 CD55P08174 381 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 PSG2P11465 335 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 SLC25A4P12235 298 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 CXCL2P19875 107 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 GNRHRP30968 328 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 PRDX2P32119 198 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 SNTB1Q13884 538 aaKnown RBP11.81□□□□□ -0.52
LIMS2-206ENST00000409754 TMEM187Q14656 261 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 CD177Q8N6Q3 437 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 ZNF565Q8N9K5 539 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
LIMS2-206ENST00000409754 Q8TCH9 128 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 PPP1R1CQ8WVI7 109 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 LRRC46Q96FV0 321 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 KIRREL1Q96J84 757 aa11.81□□□□□ -0.52
LIMS2-206ENST00000409754 VRK1Q99986 396 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 240.1 ms