RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CDKN2AP42771 156 aaKnown RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 GCSAMLQ5JQS6 135 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 FAHD1Q6P587 224 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF66Q6ZN08 573 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 WSB1Q9Y6I7 421 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM229AB2RXF0 380 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 CD96P40200 585 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 PMELP40967 661 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF273Q14593 569 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 C10orf113Q5VZT2 155 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 EIF4E3Q8N5X7 224 aaKnown RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 WFDC12Q8WWY7 111 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 MRGPRFQ96AM1 343 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 ZDBF2Q9HCK1 2354 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 IGHV3OR16-8A0A075B7F1 116 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 C9JCJ5 164 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 H3BTX0 84 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 RGS13O14921 159 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 RAF1P04049 648 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 ASB10Q8WXI3 467 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 ASB13Q8WXK3 278 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 HIST1H1EP10412 219 aaKnown RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 SPCS3P61009 180 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 RELBQ01201 579 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 PMS2P11Q13670 270 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 OR51B2Q9Y5P1 312 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 P01737 135 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 FCGR2BP31994 310 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 MRPL54Q6P161 138 aaKnown RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 PP6455Q8WZ26 134 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 GPX5O75715 221 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 GPX2P18283 190 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 C3orf36Q3SXR2 165 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 JMJD6Q6NYC1 403 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-203ENST00000409672 RHOXF1Q8NHV9 184 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 GLRX2Q9NS18 164 aa7.38□□□□□ -1.23
SCN9A-203ENST00000409672 SNRPGP15A8MWD9 76 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SPINT1O43278 529 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 TGOLN2O43493 480 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 IGLV3-27P01718 113 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 HTRA4P83105 476 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 TOMM20LQ6UXN7 152 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 C1orf162Q8NEQ5 155 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF714Q96N38 554 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SF3B6Q9Y3B4 125 aaKnown RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ALPK2Q86TB3 2170 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 OR2A25A4D2G3 310 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 CD37P11049 281 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 CTLA4P16410 223 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 RAE1P78406 368 aaKnown RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ISXQ2M1V0 245 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SSX8Q7RTT4 187 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 C1orf174Q8IYL3 243 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 hCG_38984A0A1B0GV85 526 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 GAPDHP04406 335 aaKnown RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 KLHDC8BQ8IXV7 354 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SNRNP40Q96DI7 357 aaKnown RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 POM121Q96HA1 1249 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 RECKO95980 971 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 PDLIM4P50479 330 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ERVFRD-1P60508 538 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 MGAT2Q10469 447 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 FAM216AQ8WUB2 273 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF707Q96C28 371 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 GPR35Q9HC97 309 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 TGFAP01135 160 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 RPL29P47914 159 aaKnown RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 C11orf91Q3C1V1 193 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 ITLN1Q8WWA0 313 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 HDHD3Q9BSH5 251 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 NAA60Q9H7X0 242 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 GDF9O60383 454 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 RAC3P60763 192 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 CDC20Q12834 499 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 LINC00303Q3SY05 128 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 PEAR1Q5VY43 1037 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 WDR74Q6RFH5 385 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 WDFY1Q8IWB7 410 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SSTR5P35346 364 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SUMO3P55854 103 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 PTOV1Q86YD1 416 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 OR6X1Q8NH79 312 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SCARB1Q8WTV0 552 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 NMUP48645 174 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 B3GNT9Q6UX72 402 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 RNF165Q6ZSG1 346 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 LDLRAD3Q86YD5 345 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 OR4A5Q8NH83 315 aa7.37□□□□□ -1.23
SCN9A-203ENST00000409672 LINC00615Q96LM1 132 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
SCN9A-203ENST00000409672 SRD5A1P18405 259 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 NRN1LQ496H8 165 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CDCP2Q5VXM1 449 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 LOC105371242A0A075B767 164 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 SLC17A2O00624 439 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 CRISP2P16562 243 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 LAMTOR1Q6IAA8 161 aa7.36□□□□□ -1.23
SCN9A-203ENST00000409672 RHBDD2Q6NTF9 364 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms