RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 LY6G6FQ5SQ64 297 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 C11orf88Q6PI97 169 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 DRAM2Q6UX65 266 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 C9orf139Q6ZV77 190 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 TMUB2Q71RG4 321 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 RNF144BQ7Z419 303 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 LYG2Q86SG7 212 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 FAM89BQ8N5H3 189 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 GVQW1Q8N7I0 195 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 TMEM104Q8NE00 496 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 OR52H1Q8NGJ2 320 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 OR5M8Q8NGP6 311 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 ZNF799Q96GE5 643 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 SPACA5Q96QH8 159 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CITED4Q96RK1 184 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 DIRC2Q96SL1 478 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 GPER1Q99527 375 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 OCSTAMPQ9BR26 566 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 NICN1Q9BSH3 213 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 WNT5BQ9H1J7 359 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 OR10A2Q9H208 303 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 KIF25Q9UIL4 384 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 ZDHHC8Q9ULC8 765 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 KCNK7Q9Y2U2 307 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 C5orf63A6NC05 138 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 FAM181BA6NEQ2 426 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 FOXI3A8MTJ6 420 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 F5H5K5 113 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CRTAPO75718 401 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 KNG1P01042 644 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 WNT2P09544 360 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 HRH1P35367 487 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 PTGFRP43088 359 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 P2RX3P56373 397 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 TAS2R31P59538 309 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 FGL1Q08830 312 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 SCRN3Q0VDG4 424 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 HLXQ14774 488 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 ARL6IP1Q15041 203 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 KISS1Q15726 138 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 DEFB112Q30KQ8 113 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 GFOD2Q3B7J2 385 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CRIP3Q6Q6R5 217 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 C1QL4Q86Z23 238 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 ARRDC1Q8N5I2 433 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 ITLN1Q8WWA0 313 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 MRGPRFQ96AM1 343 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CITED1Q99966 193 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 TM2D1Q9BX74 207 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 FXYD6-FXYD2A0A087WZ82 144 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 TRAV40A0A0B4J280 105 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 CEACAM18A8MTB9 384 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 SOCS1O15524 211 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 ZNF205O95201 554 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 IFNA6P05013 189 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 TMEM50BP56557 158 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 NHLRC3Q5JS37 347 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 PLAC9Q5JTB6 97 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 OR52W1Q6IF63 320 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 LIN54Q6MZP7 749 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 ZNF774Q6NX45 483 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 TMEM65Q6PI78 240 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 BRD3OSQ6XYD6 125 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 HOGA1Q86XE5 327 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 OR4K15Q8NH41 348 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 MITD1Q8WV92 249 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 OR2H1Q9GZK4 316 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 FXYD6Q9H0Q3 95 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 BANF2Q9H503 90 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 C1RLQ9NZP8 487 aa10.54□□□□□ -0.72
CHRNA1-205ENST00000409542 TRAV14DV4A0A0A6YYC5 116 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 OR6C6A6NF89 314 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 OR2AT4A6NND4 320 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 ARPC5O15511 151 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 SGCEO43556 437 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 HLA-AP01891 365 aaKnown RBP10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 CSN2P05814 226 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 SLC25A4P12235 298 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 UBE2V2Q15819 145 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 SLC22A6Q4U2R8 563 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 COMMD7Q86VX2 200 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 OR2Z1Q8NG97 314 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 OR1F12Q8NHA8 337 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 SPSB1Q96BD6 273 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 CPNE2Q96FN4 548 aaPredicted RBP10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 MED9Q9NWA0 146 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 NOP16Q9Y3C1 178 aaKnown RBP10.53□□□□□ -0.72
CHRNA1-205ENST00000409542 SERPINE3A8MV23 424 aa10.52□□□□□ -0.73
CHRNA1-205ENST00000409542 TMEM178BH3BS89 294 aa10.52□□□□□ -0.73
CHRNA1-205ENST00000409542 PMP2P02689 132 aa10.52□□□□□ -0.73
CHRNA1-205ENST00000409542 RRASP10301 218 aa10.52□□□□□ -0.73
CHRNA1-205ENST00000409542 FAHP16930 419 aa10.52□□□□□ -0.73
CHRNA1-205ENST00000409542 AP2S1P53680 142 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms