RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MEX3BQ6ZN04 569 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 FAM219AQ8IW50 185 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 CMTM1Q8IZ96 169 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 SH3BGRL2Q9UJC5 107 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 ZNF835Q9Y2P0 537 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 WIPI2Q9Y4P8 454 aa20.81■□□□□ 0.92
DNMT3A-206ENST00000406659 SPENQ96T58 3664 aaKnown RBP20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 S100GP29377 79 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 RPS23P62266 143 aaKnown RBP20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 SMIM21Q3B7S5 101 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 TMEM222Q9H0R3 208 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 ASF1BQ9NVP2 202 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 ELOVL5Q9NYP7 299 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 TMEM30CPA0ZSE6 113 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 NPIPB11E5RHQ5 1161 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 CD200P41217 278 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 PRR18Q8N4B5 295 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 PRR7Q8TB68 274 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 LRRC29Q8WV35 223 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 AQP10Q96PS8 301 aa20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 ERRFI1Q9UJM3 462 aaPredicted RBP20.8■□□□□ 0.92
DNMT3A-206ENST00000406659 C1QTNF9BB2RNN3 333 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 ATP6V1G2-DDX39BF2Z307 99 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 PSPNO60542 156 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 NMBP08949 121 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 UCNP55089 124 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 PRR30Q53SZ7 412 aaPredicted RBP20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 TMEM268Q5VZI3 342 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 LHFPL5Q8TAF8 219 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 USB1Q9BQ65 265 aaKnown RBP20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 MBNL3Q9NUK0 354 aaKnown RBP20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 OR1A1Q9P1Q5 309 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 TMED3Q9Y3Q3 217 aa20.79■□□□□ 0.92
DNMT3A-206ENST00000406659 C16orf97H3BN30 126 aa20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 HSPA12AO43301 675 aa20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 SCGB1D2O95969 90 aa20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 RRASP10301 218 aa20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 RBPJQ06330 500 aa20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 KCNIP1Q9NZI2 227 aa20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 LSM5Q9Y4Y9 91 aaKnown RBP20.78■□□□□ 0.92
DNMT3A-206ENST00000406659 MSGN1A6NI15 193 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 SELENOVP59797 346 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 HOXA4Q00056 320 aaPredicted RBP20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 HMGN3Q15651 99 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 ZNF695Q8IW36 515 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 SLC35G3Q8N808 338 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 OR10V1Q8NGI7 309 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 TMEM171Q8WVE6 324 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 PHYHIPLQ96FC7 376 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 TAF9BQ9HBM6 251 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 LAMA5O15230 3695 aa20.77■□□□□ 0.92
DNMT3A-206ENST00000406659 ZSCAN5BA6NJL1 495 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 IFNL4K9M1U5 179 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 DEDDO75618 318 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 PTBP3O95758 552 aaKnown RBP20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 CD40P25942 277 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 SLC35E4Q6ICL7 350 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 C22orf34Q6ZV56 151 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 PDZD9Q8IXQ8 264 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 TMEM56Q96MV1 263 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 SLC25A32Q9H2D1 315 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 ZC4H2Q9NQZ6 224 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 TMEM56-RWDD3S4R434 201 aa20.77■□□□□ 0.91
DNMT3A-206ENST00000406659 CEP295Q9C0D2 2601 aa20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 PGLYRP1O75594 196 aaPredicted RBP20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 RP1L1Q8IWN7 2480 aaPredicted RBP20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 OR10Z1Q8NGY1 313 aa20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 ZFP57Q9NU63 452 aa20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 RAXQ9Y2V3 346 aa20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 ZGRF1Q86YA3 2104 aa20.76■□□□□ 0.91
DNMT3A-206ENST00000406659 MBPP02686 304 aaPredicted RBP20.75■□□□□ 0.91
DNMT3A-206ENST00000406659 CCKARP32238 428 aa20.75■□□□□ 0.91
DNMT3A-206ENST00000406659 COL10A1Q03692 680 aa20.75■□□□□ 0.91
DNMT3A-206ENST00000406659 BVESQ8NE79 360 aa20.75■□□□□ 0.91
DNMT3A-206ENST00000406659 UBALD1Q8TB05 177 aa20.75■□□□□ 0.91
DNMT3A-206ENST00000406659 GPHA2Q96T91 129 aa20.75■□□□□ 0.91
DNMT3A-206ENST00000406659 IGLV3-9A0A075B6K5 115 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 TNFSF12O43508 249 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 SELENOHQ8IZQ5 122 aaKnown RBP20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 RELL2Q8NC24 303 aaPredicted RBP20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 MEGF10Q96KG7 1140 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 CXorf58Q96LI9 332 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 OR2V2Q96R30 315 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 SHARPINQ9H0F6 387 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 RBM7Q9Y580 266 aaKnown RBP20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 SPRY3O43610 288 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 TFF1P04155 84 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 TPT1P13693 172 aaKnown RBP20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 AESQ08117 197 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 TMEM108Q6UXF1 575 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 STOML3Q8TAV4 291 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 MED9Q9NWA0 146 aa20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 MAP1BP46821 2468 aaKnown RBP20.74■□□□□ 0.91
DNMT3A-206ENST00000406659 DMXL2Q8TDJ6 3036 aa20.73■□□□□ 0.91
DNMT3A-206ENST00000406659 H0Y980 276 aa20.73■□□□□ 0.91
DNMT3A-206ENST00000406659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.73■□□□□ 0.91
DNMT3A-206ENST00000406659 K7EPK0 472 aa20.73■□□□□ 0.91
DNMT3A-206ENST00000406659 HKR1P10072 659 aa20.73■□□□□ 0.91
DNMT3A-206ENST00000406659 UCP1P25874 307 aa20.73■□□□□ 0.91
DNMT3A-206ENST00000406659 RPL12P30050 165 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms