RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CHD9Q3L8U1 2897 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 A0A1B0GW64 132 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 LILRA5A6NI73 299 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 IGHG1P01857 330 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 FOLR1P15328 257 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 KLK2P20151 261 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 PDLIM4P50479 330 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 HIST1H3AP68431 136 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 UEVLDQ8IX04 471 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 DECR2Q9NUI1 292 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 PSG11Q9UQ72 335 aa14.02□□□□□ -0.16
COL4A3BP-204ENST00000405807 H3BML4 177 aa14.02□□□□□ -0.17
COL4A3BP-204ENST00000405807 CDAP32320 146 aa14.02□□□□□ -0.17
COL4A3BP-204ENST00000405807 SUMO3P55854 103 aaPredicted RBP14.02□□□□□ -0.17
COL4A3BP-204ENST00000405807 PRSS8Q16651 343 aa14.02□□□□□ -0.17
COL4A3BP-204ENST00000405807 KIAA0895LQ68EN5 471 aa14.02□□□□□ -0.17
COL4A3BP-204ENST00000405807 IGKV1D-8A0A087WSZ0 117 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 A0A1B0GV50 99 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 CLEC18AA5D8T8 446 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 RER1O15258 196 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 FAHP16930 419 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 GNRHRP30968 328 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 VEGFBP49765 207 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 TMEM156Q8N614 296 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 CLEC18CQ8NCF0 446 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 KLHDC7BQ96G42 594 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 RARRES2Q99969 163 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 CLN8Q9UBY8 286 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 KNL1Q8NG31 2342 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 A0A1B0GU03 582 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 FBLP22087 321 aaKnown RBP14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 GRB2P62993 217 aaKnown RBP14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZCCHC14Q8WYQ9 949 aaKnown RBP14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 MS4A10Q96PG2 267 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 ELL3Q9HB65 397 aaPredicted RBP14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 GPR27Q9NS67 375 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 PLEKHJ1Q9NW61 149 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 RFNGQ9Y644 331 aa14.01□□□□□ -0.17
COL4A3BP-204ENST00000405807 WDR87Q6ZQQ6 2873 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 TDRD6O60522 2096 aaKnown RBP14□□□□□ -0.17
COL4A3BP-204ENST00000405807 DRD1P21728 446 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 TNFSF4P23510 183 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 PIGPP57054 158 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 FOXF1Q12946 379 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 DMRTC1Q5HYR2 192 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 APH1AQ96BI3 265 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 ACY3Q96HD9 319 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 ATP6V0BQ99437 205 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 VAMP8Q9BV40 100 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 MCTS1Q9ULC4 181 aaKnown RBP14□□□□□ -0.17
COL4A3BP-204ENST00000405807 ARID1AO14497 2285 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 C10orf142B7Z368 130 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 C1QL1O75973 258 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 MFAP5Q13361 173 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 IL13RA2Q14627 380 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF66Q6ZN08 573 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF429Q86V71 674 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 PNRC2Q9NPJ4 139 aaKnown RBP14□□□□□ -0.17
COL4A3BP-204ENST00000405807 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 ANXA10Q9UJ72 324 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 HSD17B6O14756 317 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 TLX3O43711 291 aaPredicted RBP14□□□□□ -0.17
COL4A3BP-204ENST00000405807 GLB1P16278 677 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 SLC25A47Q6Q0C1 308 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 PLXDC2Q6UX71 529 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 TEX43Q6ZNM6 134 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 C6orf201Q7Z4U5 140 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 SLC38A9Q8NBW4 561 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 TVP23CQ96ET8 276 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 VN1R1Q9GZP7 353 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 SH3BGRL3Q9H299 93 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 NAA60Q9H7X0 242 aa14□□□□□ -0.17
COL4A3BP-204ENST00000405807 TRIOO75962 3097 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 PHF3Q92576 2039 aaKnown RBP13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 RNF212BA8MTL3 300 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 H3BMH7 237 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 SAP30O75446 220 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 FCGR2AP12318 317 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 ANOS1P23352 680 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF133P52736 654 aaPredicted RBP13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 FBXW4P57775 412 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 TMEM187Q14656 261 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 ABCA11PQ4W5N1 156 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 RP1P56715 2156 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF43P17038 809 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 CEBPDP49716 269 aaPredicted RBP13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 RAB9AP51151 201 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 MYBPHQ13203 477 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 SP6Q3SY56 376 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 CARD17Q5XLA6 110 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 CRIP3Q6Q6R5 217 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 FAM213BQ8TBF2 198 aa13.99□□□□□ -0.17
COL4A3BP-204ENST00000405807 TRBV24-1A0A075B6N3 115 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 NSG1A0A0A6YYJ2 146 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 XRCC2O43543 280 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 ZNF728P0DKX0 622 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 TMEM225BP0DP42 221 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 DUSP1P28562 367 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 RHOGP84095 191 aa13.98□□□□□ -0.17
COL4A3BP-204ENST00000405807 LRTM2Q8N967 370 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms