RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 A0A0A6YYJ9 748 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 OR5H14A6NHG9 310 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 K7N7A8 449 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 PPIHO43447 177 aaKnown RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 ADAM20O43506 726 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 SSNA1O43805 119 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 CLDN1O95832 211 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 COX6B1P14854 86 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 DAOP14920 347 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 BTG1P62324 171 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 IL13RA1P78552 427 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 SP5Q6BEB4 398 aaPredicted RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 C11orf71Q6IPW1 123 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 PEG10Q86TG7 708 aaKnown RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 DTX2Q86UW9 622 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 FGFRL1Q8N441 504 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 ZNF561Q8N587 486 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 SNX22Q96L94 193 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 GAFA1Q96PS6 74 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 TRAF4Q9BUZ4 470 aaPredicted RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 NARFLQ9H6Q4 476 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 ZNF69Q9UC07 566 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 ZNF222Q9UK12 451 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 VSIG4Q9Y279 399 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 NKX6-3A6NJ46 265 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 A8MV72 311 aaPredicted RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 J3QKU1 62 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 MGST3O14880 152 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 PLA2G2AP14555 144 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 VAMP1P23763 118 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 IL2RGP31785 369 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 SSTR5P35346 364 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 UBE2MP61081 183 aaKnown RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 HLA-DRB3P79483 266 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 HERPUD1Q15011 391 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 ATPAF1Q5TC12 328 aaPredicted RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 TEX36Q5VZQ5 186 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 LYPD2Q6UXB3 125 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 OR52B4Q8NGK2 314 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 OR13A1Q8NGR1 328 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 OR1L1Q8NH94 360 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 OR10J5Q8NHC4 309 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 MRGPRFQ96AM1 343 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 SPOCK3Q9BQ16 436 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 DNTTIP1Q9H147 329 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 LIME1Q9H400 295 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 SLC2A8Q9NY64 477 aa3.09□□□□□ -1.91
RTN4-208ENST00000404909 FBXO9Q9UK97 447 aaPredicted RBP3.09□□□□□ -1.91
RTN4-208ENST00000404909 IGKV1-6A0A0C4DH72 117 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 ODAMA1E959 279 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 FAM172BPA6NC97 362 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 C12orf77C9JDV5 145 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 IGHV3-7P01780 117 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 VSIG10L2P0DP72 767 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 AADACP22760 399 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 OMGP23515 440 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 KCNJ3P48549 501 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 P2RX3P56373 397 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 HERV-K104P61576 105 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 CD300CQ08708 224 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 AADACL3Q5VUY0 350 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 SHEQ5VZ18 495 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 SLC35E4Q6ICL7 350 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 ZNF788Q6ZQV5 615 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 MOB1BQ7L9L4 216 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 SLC36A1Q7Z2H8 476 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 ZNF565Q8N9K5 539 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 ADAD2Q8NCV1 583 aaKnown RBP3.09□□□□□ -1.92
RTN4-208ENST00000404909 OR5D13Q8NGL4 314 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 SECTM1Q8WVN6 248 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 H1FXQ92522 213 aaKnown RBP3.09□□□□□ -1.92
RTN4-208ENST00000404909 ARL11Q969Q4 196 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 SDSLQ96GA7 329 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 ARPC5LQ9BPX5 153 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 TMEM246Q9BRR3 403 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 OR51J1Q9H342 316 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 MYOZ1Q9NP98 299 aaPredicted RBP3.09□□□□□ -1.92
RTN4-208ENST00000404909 DLL4Q9NR61 685 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 OR1A1Q9P1Q5 309 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 SLC25A10Q9UBX3 287 aaPredicted RBP3.09□□□□□ -1.92
RTN4-208ENST00000404909 RBM7Q9Y580 266 aaKnown RBP3.09□□□□□ -1.92
RTN4-208ENST00000404909 DOCK11Q5JSL3 2073 aa3.09□□□□□ -1.92
RTN4-208ENST00000404909 YLPM1P49750 1951 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 TRBV6-6A0A0A6YYG2 114 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 IGHV3-43A0A0B4J1X8 118 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SIGLEC5O15389 551 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 DIRAS3O95661 229 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PPYP01298 95 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 HLA-AP01891 365 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 HBZP02008 142 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CTXN2P0C2S0 81 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 ZNF728P0DKX0 622 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 IGHV3-43DP0DP04 118 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CEACAM6P40199 344 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 KCNJ8Q15842 424 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 ABCA11PQ4W5N1 156 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 FAM53AQ6NSI3 398 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR10V1Q8NGI7 309 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR4A4PQ8NGN8 299 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CASTOR1Q8WTX7 329 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms