RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 STUMQ69YW2 141 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 ZNF660Q6AZW8 331 aaPredicted RBP17.56■□□□□ 0.4
TPM1-208ENST00000404484 C20orf204Q6ZNR8 217 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 SEC22CQ9BRL7 303 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 KCNIP1Q9NZI2 227 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 PCDHB10Q9UN67 800 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 GPR132Q9UNW8 380 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 TMEM178BH3BS89 294 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 LGALS8O00214 317 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 MGST3O14880 152 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 OR4E1P0C645 316 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 PGAM2P15259 253 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 HERV-K104P61576 105 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 KRBOX4Q5JUW0 171 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 TRAT1Q6PIZ9 186 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 OR5D13Q8NGL4 314 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 ZFAND1Q8TCF1 268 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 SDSLQ96GA7 329 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 CABLES2Q9BTV7 478 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 TMEM106BQ9NUM4 274 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 ZNF69Q9UC07 566 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 ITGB1BP2Q9UKP3 347 aa17.55■□□□□ 0.4
TPM1-208ENST00000404484 C14orf166Q9Y224 244 aaKnown RBP17.55■□□□□ 0.4
TPM1-208ENST00000404484 ARFGEF3Q5TH69 2177 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 OR5H14A6NHG9 310 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 NKX6-3A6NJ46 265 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 SCTP09683 121 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 FCGR2CP31995 323 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 SEC61A1P61619 476 aaKnown RBP17.54■□□□□ 0.4
TPM1-208ENST00000404484 C6orf183Q5T699 404 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 ZNF431Q8TF32 576 aaPredicted RBP17.54■□□□□ 0.4
TPM1-208ENST00000404484 VRK1Q99986 396 aaPredicted RBP17.54■□□□□ 0.4
TPM1-208ENST00000404484 RAB1BQ9H0U4 201 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 DNTTIP1Q9H147 329 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 ZNF665Q9H7R5 613 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 ING3Q9NXR8 418 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 METRNQ9UJH8 293 aa17.54■□□□□ 0.4
TPM1-208ENST00000404484 MAP1AP78559 2803 aaPredicted RBP17.54■□□□□ 0.4
TPM1-208ENST00000404484 IGHV1-69-2A0A0G2JMI3 117 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 K7N7A8 449 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 HPXP02790 462 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 RCC1P18754 421 aaPredicted RBP17.53■□□□□ 0.4
TPM1-208ENST00000404484 HMGN3Q15651 99 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 IGSF11Q5DX21 431 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 DTX2Q86UW9 622 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 TMEM185AQ8NFB2 350 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 CCL17Q92583 94 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 MOB3AQ96BX8 217 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 COQ2Q96H96 371 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 SHARPINQ9H0F6 387 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 FAM234AQ9H0X4 552 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 KIF25Q9UIL4 384 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 ZNF221Q9UK13 617 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 PRRC2AP48634 2157 aaKnown RBP17.53■□□□□ 0.4
TPM1-208ENST00000404484 PPIAL4EA0A075B759 164 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 MEIKINA0A087WXM9 373 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 PPIAL4DF5H284 164 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 BET1O15155 118 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 PPIAL4FP0DN26 164 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 UCP3P55916 312 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 AESQ08117 197 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 KCNJ8Q15842 424 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 HFEQ30201 348 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 FAM201AQ5SY85 155 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 NCOR1P1Q9H4R4 102 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 PPIAL4AQ9Y536 164 aa17.53■□□□□ 0.4
TPM1-208ENST00000404484 FAM172BPA6NC97 362 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 NPIPB11E5RHQ5 1161 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 CTSDP07339 412 aaPredicted RBP17.52■□□□□ 0.39
TPM1-208ENST00000404484 ZNF728P0DKX0 622 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 TMEM128Q5BJH2 165 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 C11orf71Q6IPW1 123 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 ZNF788Q6ZQV5 615 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 DEFB108BQ8NET1 73 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 OR10J5Q8NHC4 309 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 CAPSLQ8WWF8 208 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 C5orf66Q9H5L9 145 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 TANC2Q9HCD6 1990 aa17.52■□□□□ 0.39
TPM1-208ENST00000404484 TRBV6-7A0A0A0MS04 114 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 PPYP01298 95 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 TFF1P04155 84 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 SULT1A3P0DMM9 295 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 SULT1A4P0DMN0 295 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 IL13RA1P78552 427 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 DHRS2Q13268 280 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 HERPUD1Q15011 391 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 FCN2Q15485 313 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 LPCAT3Q6P1A2 487 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 C11orf88Q6PI97 169 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 LYG2Q86SG7 212 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 SLC38A6Q8IZM9 456 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 NINJ1Q92982 152 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 FXYD6Q9H0Q3 95 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 TAF9BQ9HBM6 251 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 OPN4Q9UHM6 478 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 MAB21L2Q9Y586 359 aa17.51■□□□□ 0.39
TPM1-208ENST00000404484 SIGLEC5O15389 551 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 HLA-AP01891 365 aaKnown RBP17.5■□□□□ 0.39
TPM1-208ENST00000404484 GYPAP02724 150 aa17.5■□□□□ 0.39
TPM1-208ENST00000404484 AKR1C4P17516 323 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms