RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ZNF728P0DKX0 622 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 NAT1P18440 290 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-201ENST00000404210 GATA3P23771 443 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-201ENST00000404210 DLX6P56179 175 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
LINC00339-201ENST00000404210 PAX8Q06710 450 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF273Q14593 569 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 BTNL3Q6UXE8 466 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 TCF23Q7RTU1 214 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 TRAPPC6BQ86SZ2 158 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 HOGA1Q86XE5 327 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 OR10A7Q8NGE5 316 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 SETD6Q8TBK2 473 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 TMEM186Q96B77 213 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 COX4I2Q96KJ9 171 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF714Q96N38 554 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 ST6GALNAC5Q9BVH7 336 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 GAL3ST2Q9H3Q3 398 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 LINC00574Q9H8X3 128 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 AKIP1Q9NQ31 210 aa10.14□□□□□ -0.79
LINC00339-201ENST00000404210 TRAV39A0A0B4J263 110 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 KBTBD11-OT1A0A1B0GTJ5 212 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 A0A1W2PPE2 198 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 A0A1W2PR64 198 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 RBP4P02753 201 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 GLP1RP43220 463 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 KIR2DS4P43632 304 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 ARF6P62330 175 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 LSAMPQ13449 338 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 HMGN3Q15651 99 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF79Q15937 498 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 PYDC2Q56P42 97 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 Q6ZPA2 131 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 GLCCI1Q86VQ1 547 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 KIR3DL3Q8N743 410 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 GDPD1Q8N9F7 314 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 OR52I2Q8NH67 350 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 C18orf12Q96KH6 178 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 TAF9BQ9HBM6 251 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF286AQ9HBT8 521 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 HIF1ANQ9NWT6 349 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 MTFP1Q9UDX5 166 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 ZNF230Q9UIE0 474 aaPredicted RBP10.13□□□□□ -0.79
LINC00339-201ENST00000404210 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 KPTNQ9Y664 436 aa10.13□□□□□ -0.79
LINC00339-201ENST00000404210 FLNBO75369 2602 aaKnown RBP10.12□□□□□ -0.79
LINC00339-201ENST00000404210 C12orf77C9JDV5 145 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 SPINT2O43291 252 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 INHBBP09529 407 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 FOSL1P15407 271 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 CCL3L1P16619 93 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 DCAF12L2Q5VW00 463 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 HEPN1Q6WQI6 88 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 GVQW1Q8N7I0 195 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 BEST4Q8NFU0 473 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 OR52M1Q8NGK5 317 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 SMIM4Q8WVI0 70 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 GCDHQ92947 438 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-201ENST00000404210 THAP7Q9BT49 309 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-201ENST00000404210 IFT46Q9NQC8 304 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 IDI2-AS1Q9NZ38 188 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 KLK11Q9UBX7 282 aa10.12□□□□□ -0.79
LINC00339-201ENST00000404210 MEX3AA1L020 520 aaKnown RBP10.11□□□□□ -0.79
LINC00339-201ENST00000404210 MEIS3P1A6NDR6 274 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 J3QLI3 93 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 F2RL2O00254 374 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 CD5LO43866 347 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 DIRAS3O95661 229 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 HBZP02008 142 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 SCTP09683 121 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 CTXN2P0C2S0 81 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 GSTT2P0CG29 244 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 GSTT2BP0CG30 244 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 CD99P14209 185 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 PRTN3P24158 256 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 CD40LGP29965 261 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 RCVRNP35243 200 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 PPP5CP53041 499 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 ACTBP60709 375 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 ACTG1P63261 375 aa10.11□□□□□ -0.79
LINC00339-201ENST00000404210 HTD2P86397 168 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms