RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TGIF2LXQ8IUE1 241 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 OR1B1Q8NGR6 318 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 FBLIM1Q8WUP2 373 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 DDA1Q9BW61 102 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
COL18A1-204ENST00000400337 MS4A18H0YCH9 400 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 OR2J3O76001 311 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 EWSR1Q01844 656 aaKnown RBP eCLIP15.83■□□□□ 0.128e-7■■■■■ 29
COL18A1-204ENST00000400337 ROM1Q03395 351 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 GAMTQ14353 236 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 MS4A18Q3C1V0 323 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 ZNF260Q3ZCT1 412 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 MS4A3Q96HJ5 214 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 TRBV5-5A0A0J9YX44 114 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 CDS2O95674 445 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 HLA-DQB1P01920 261 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 SNRPEP62304 92 aaKnown RBP15.82■□□□□ 0.12
COL18A1-204ENST00000400337 UBE2L3P68036 154 aaKnown RBP15.82■□□□□ 0.12
COL18A1-204ENST00000400337 HSD17B13Q7Z5P4 300 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-204ENST00000400337 LOXL4Q96JB6 756 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 UBTD1Q9HAC8 227 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 SLC25A47Q6Q0C1 308 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 SSMEM1Q8WWF3 244 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 LOC102723971A0A1B0GUV8 181 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 FCGR3AP08637 254 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 PPP1CCP36873 323 aaKnown RBP15.82■□□□□ 0.12
COL18A1-204ENST00000400337 TGIF1Q15583 401 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 MBPP02686 304 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-204ENST00000400337 LINC00052Q96N35 136 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 SCN10AQ9Y5Y9 1956 aa15.82■□□□□ 0.12
COL18A1-204ENST00000400337 A0A1W2PR77 199 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 IFI6P09912 130 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 CEACAM21Q3KPI0 293 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 NOL4LQ96MY1 436 aaPredicted RBP15.81■□□□□ 0.12
COL18A1-204ENST00000400337 OPN3Q9H1Y3 402 aaPredicted RBP15.81■□□□□ 0.12
COL18A1-204ENST00000400337 TPRX1Q8N7U7 411 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 OR10D4PQ8NGN7 298 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 CCL21O00585 134 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 TMEM50BP56557 158 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 ZNF441Q8N8Z8 693 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 FGF11Q92914 225 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 PRDM6Q9NQX0 595 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 A0A1W2PPE3 182 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 LMX1BO60663 402 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 SFTPCP11686 197 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 SULT1A1P50225 295 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 UCP2P55851 309 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 COL10A1Q03692 680 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 FA2HQ7L5A8 372 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 OR52L2PQ8NGH6 319 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 HARBI1Q96MB7 349 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 ASXL3Q9C0F0 2248 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 CCL8P80075 99 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 KLHDC1Q8N7A1 406 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 OR1K1Q8NGR3 316 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 FAM210BQ96KR6 192 aa15.81■□□□□ 0.12
COL18A1-204ENST00000400337 CACNA1IQ9P0X4 2223 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 CRYBA1P05813 215 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 BMI1P35226 326 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 C1orf185Q5T7R7 199 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 OR10A7Q8NGE5 316 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 Q9N2K0 584 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 RCC2Q9P258 522 aaKnown RBP15.8■□□□□ 0.12
COL18A1-204ENST00000400337 YTHDF2Q9Y5A9 579 aaKnown RBP15.8■□□□□ 0.12
COL18A1-204ENST00000400337 INSIG2Q9Y5U4 225 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 LEUTXA8MZ59 168 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 GATCO43716 136 aaKnown RBP15.8■□□□□ 0.12
COL18A1-204ENST00000400337 GABRA6Q16445 453 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 FLYWCH2Q96CP2 140 aaKnown RBP15.8■□□□□ 0.12
COL18A1-204ENST00000400337 IGKV1D-42A0A075B6H8 117 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 PRDX2P32119 198 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 HIST1H3AP68431 136 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 ZBTB34Q8NCN2 500 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 ADAMTS17Q8TE56 1095 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 LPAR5Q9H1C0 372 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 TNFRSF19Q9NS68 423 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 PRSS50Q9UI38 385 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 WIPI2Q9Y4P8 454 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 COX6A1P12074 109 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 BRS3P32247 399 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 GOLT1BQ9Y3E0 138 aa15.8■□□□□ 0.12
COL18A1-204ENST00000400337 A0A1B0GU03 582 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 A0A1W2PNV4 684 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 KIAA1324LA8MWY0 1029 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-204ENST00000400337 SYNGR1O43759 233 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 FAM78BQ5VT40 261 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 ASCL5Q7RTU5 278 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 TECRQ9NZ01 308 aaKnown RBP15.79■□□□□ 0.12
COL18A1-204ENST00000400337 PIPOXQ9P0Z9 390 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 TMEM218A2RU14 115 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 C7orf66A4D0T2 115 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 VSIG10L2P0DP72 767 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 BVESQ8NE79 360 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 LHFPL6Q9Y693 200 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 FCN1O00602 326 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 ALX4Q9H161 411 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-204ENST00000400337 CLEC5AQ9NY25 188 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 COA4Q9NYJ1 87 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 C17orf51A8MQB3 221 aa15.79■□□□□ 0.12
COL18A1-204ENST00000400337 UCNP55089 124 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms