RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 EWSR1Q01844 656 aaKnown RBP eCLIP11.52□□□□□ -0.57
ITSN1-208ENST00000399349 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
ITSN1-208ENST00000399349 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.57
ITSN1-208ENST00000399349 ZNF721Q8TF20 911 aa11.52□□□□□ -0.57
ITSN1-208ENST00000399349 RREB1Q92766 1687 aa11.52□□□□□ -0.57
ITSN1-208ENST00000399349 TDRD6O60522 2096 aaKnown RBP11.51□□□□□ -0.57
ITSN1-208ENST00000399349 A0A0J9YW62 118 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 ZNF253O75346 499 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 SMIM6P0DI80 62 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 PSG2P11465 335 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 LIFP15018 202 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 AMELYQ99218 206 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 TMEM204Q9BSN7 226 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 LPAR5Q9H1C0 372 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 KIAA1217Q5T5P2 1943 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 PAGE4O60829 102 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 PTP4A3O75365 173 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 CD3EP07766 207 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 FLYWCH2Q96CP2 140 aaKnown RBP11.51□□□□□ -0.57
ITSN1-208ENST00000399349 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 LPAR2Q9HBW0 351 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 PAPPAQ13219 1627 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 TRAV38-1A0A0B4J264 116 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 NPIPB8E9PQR5 432 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 ANKRD34CP0C6C1 535 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 RNF224P0DH78 156 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 CCKARP32238 428 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 RPEL1Q2QD12 228 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 CHST5Q9GZS9 411 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 THYN1Q9P016 225 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 PRSS50Q9UI38 385 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 OOEPA6NGQ2 149 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 FAM157CP0CG43 387 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
ITSN1-208ENST00000399349 DCAF10Q5QP82 559 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 WDR31Q8NA23 367 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 OR4C5Q8NGB2 326 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 OR52L2PQ8NGH6 319 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 KLK13Q9UKR3 277 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 HSF4Q9ULV5 492 aa11.51□□□□□ -0.57
ITSN1-208ENST00000399349 J3QT63 122 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 DLK1P80370 383 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 PRSS53Q2L4Q9 553 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 DCAF12L2Q5VW00 463 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 RAB1CQ92928 201 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 RNF2Q99496 336 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 CRISP2P16562 243 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 MDKP21741 143 aaPredicted RBP11.5□□□□□ -0.57
ITSN1-208ENST00000399349 ZFP36L2P47974 494 aaKnown RBP11.5□□□□□ -0.57
ITSN1-208ENST00000399349 RANP62826 216 aaKnown RBP11.5□□□□□ -0.57
ITSN1-208ENST00000399349 ATP6V1FQ16864 119 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 ROS1P08922 2347 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 J3QR89 54 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 HOXD4P09016 255 aaPredicted RBP11.5□□□□□ -0.57
ITSN1-208ENST00000399349 RUNX1Q01196 453 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 EIF4EBP2Q13542 120 aaPredicted RBP11.5□□□□□ -0.57
ITSN1-208ENST00000399349 MDP1Q86V88 176 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 TGIF2LYQ8IUE0 185 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 OR10A7Q8NGE5 316 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 OR10G8Q8NGN5 311 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 PRR7Q8TB68 274 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 COA4Q9NYJ1 87 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 KCNK7Q9Y2U2 307 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 GNG7O60262 68 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 HIST3H3Q16695 136 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 ISXQ2M1V0 245 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 PGLYRP3Q96LB9 341 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 OR2W1Q9Y3N9 320 aa11.5□□□□□ -0.57
ITSN1-208ENST00000399349 SCN2AQ99250 2005 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 VWA1Q6PCB0 445 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 LRRC75AQ8NAA5 344 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 NAT8Q9UHE5 227 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 DNASE2O00115 360 aaPredicted RBP11.49□□□□□ -0.57
ITSN1-208ENST00000399349 GCM2O75603 506 aaPredicted RBP11.49□□□□□ -0.57
ITSN1-208ENST00000399349 SULT1A1P50225 295 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 CCL8P80075 99 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 SLC22A18ASQ8N1D0 253 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 CLN8Q9UBY8 286 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 AP4M1O00189 453 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 CXCL2P19875 107 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 CEACAM3P40198 252 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 RAB1BQ9H0U4 201 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 DIDO1Q9BTC0 2240 aaKnown RBP11.49□□□□□ -0.57
ITSN1-208ENST00000399349 GZMHP20718 246 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
ITSN1-208ENST00000399349 APOBEC4Q8WW27 367 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms