RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 OR6X1Q8NH79 312 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 C20orf141Q9NUB4 165 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 NUMA1Q14980 2115 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 A0A087WUJ7 227 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 GALR2O43603 387 aaPredicted RBP8.47□□□□□ -1.05
SMAD9-203ENST00000399275 S1PR2O95136 353 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 EMDP50402 254 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 ERHP84090 104 aaKnown RBP8.47□□□□□ -1.05
SMAD9-203ENST00000399275 ZNF841Q6ZN19 808 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 H1FNTQ75WM6 255 aaPredicted RBP8.47□□□□□ -1.05
SMAD9-203ENST00000399275 LPAR4Q99677 370 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
SMAD9-203ENST00000399275 HILPDAQ9Y5L2 63 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 EVPLQ92817 2033 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 TRAV39A0A0B4J263 110 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SNAI2O43623 268 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 FGF17O60258 216 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SRSF10O75494 262 aaKnown RBP8.47□□□□□ -1.05
SMAD9-203ENST00000399275 PSG1P11464 419 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 C1orf61Q13536 156 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 TMEM177Q53S58 311 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 PLXDC1Q8IUK5 500 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 IP6K3Q96PC2 410 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 GLRX2Q9NS18 164 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 CDC42EP2O14613 210 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 GREM1O60565 184 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 DHRS3O75911 302 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 PGLYRP3Q96LB9 341 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 C4orf45Q96LM5 186 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 OR8B2Q96RD0 313 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 TMEM147Q9BVK8 224 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 TXNIPQ9H3M7 391 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 SS18L2Q9UHA2 77 aa8.47□□□□□ -1.05
SMAD9-203ENST00000399275 RBFOX2O43251 390 aaKnown RBP eCLIP8.46□□□□□ -1.05
SMAD9-203ENST00000399275 UNQ5815/PRO19632Q6UWF5 114 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 KIRREL2Q6UWL6 708 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 OR1F12Q8NHA8 337 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 LOXL4Q96JB6 756 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 WDR54Q9H977 334 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.46□□□□□ -1.05
SMAD9-203ENST00000399275 A0A0G2JMM0 328 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 A0A1W2PPB8 328 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 KIR3DP1A8MWS1 328 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 LINC00869P0C866 280 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 AGAP20933 346 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 COL8A1P27658 744 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 ZNF141Q15928 474 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 OR11G2Q8NGC1 345 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 MRAPQ8TCY5 172 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 AAMDCQ9H7C9 122 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 B9D1Q9UPM9 204 aa8.46□□□□□ -1.05
SMAD9-203ENST00000399275 THSD7AQ9UPZ6 1657 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 LOC389332A0A1B0GUA5 103 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 DNAL4O96015 105 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 PRSS2P07478 247 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 ZBTB25P24278 435 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 CDKN2AP42771 156 aaKnown RBP8.46□□□□□ -1.06
SMAD9-203ENST00000399275 TDGF1P3P51864 188 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 UCP3P55916 312 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 C9orf135Q5VTT2 229 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 TBC1D26Q86UD7 250 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 MGST2Q99735 147 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 CCL26Q9Y258 94 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
SMAD9-203ENST00000399275 QSER1Q2KHR3 1735 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 UBR3Q6ZT12 1888 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 F5H697 171 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 FAM157CP0CG43 387 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 CCR5P51681 352 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 CLDN18P56856 261 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 PPP1CAP62136 330 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 RPL11P62913 178 aaKnown RBP8.46□□□□□ -1.06
SMAD9-203ENST00000399275 C17orf67Q0P5P2 114 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 TM4SF20Q53R12 229 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 WDR38Q5JTN6 314 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 GALNT14Q96FL9 552 aa8.46□□□□□ -1.06
SMAD9-203ENST00000399275 TMSB15BA0A087X1C1 80 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 CRYAAP02489 173 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 CEACAM16Q2WEN9 425 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 LIAT1Q6ZQX7 453 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF355PQ9NSJ1 428 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 MRPS17Q9Y2R5 130 aaKnown RBP8.45□□□□□ -1.06
SMAD9-203ENST00000399275 A0A1W2PPC4 97 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 A8MWV9 139 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF324O75467 553 aaPredicted RBP8.45□□□□□ -1.06
SMAD9-203ENST00000399275 RPS15P62841 145 aaKnown RBP8.45□□□□□ -1.06
SMAD9-203ENST00000399275 VN1R2Q8NFZ6 395 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 OR51E1Q8TCB6 317 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 CHST5Q9GZS9 411 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 PBOV1Q9GZY1 135 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 MAP1LC3AQ9H492 121 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 TUBA4BQ9H853 241 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 ST6GALNAC2Q9UJ37 374 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 TNFSF15O95150 251 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 NXPH2O95156 264 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
SMAD9-203ENST00000399275 HOXB3P14651 431 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms