RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZNF501Q96CX3 271 aaPredicted RBP12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 GPX7Q96SL4 187 aaPredicted RBP12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 NOTCH4Q99466 2003 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 TOX4O94842 621 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 DSCR4P56555 118 aaPredicted RBP12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 ARRDC1-AS1Q9H2J1 176 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 KRASP01116 189 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 GALNSP34059 522 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 SLC25A45Q8N413 288 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BKO60814 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BJP06899 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BOP23527 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BBP33778 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 FAM3BP58499 235 aaPredicted RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BDP58876 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BCP62807 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST2H2BEQ16778 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 ZNF774Q6NX45 483 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 OR10G4Q8NGN3 311 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 MRPL30Q8TCC3 161 aaKnown RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BHQ93079 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BNQ99877 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIST1H2BMQ99879 126 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 NDUFAF3Q9BU61 184 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 PLA2G3Q9NZ20 509 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 CEP350Q5VT06 3117 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 MDC1Q14676 2089 aaKnown RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 ROM1Q03395 351 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 UCN2Q96RP3 112 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 RSG1Q9BU20 258 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 DEGS1O15121 323 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 GCH1P30793 250 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 VHLLQ6RSH7 139 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 MISP3Q96FF7 219 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 TWSG1Q9GZX9 223 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 PDCD6O75340 191 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 PPYP01298 95 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 GRPP07492 148 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 CCL11P51671 97 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 EGR4Q05215 589 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 GBF1Q92538 1859 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 DAZAP1Q96EP5 407 aaKnown RBP12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 FOXB1Q99853 325 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 HIPK2Q9H2X6 1198 aa12.74□□□□□ -0.37
RPRD1A-202ENST00000399022 TSPAN2O60636 221 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 CELA2AP08217 269 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 CD82P27701 267 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 GABRA2P47869 451 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 ABLIM2Q6H8Q1 611 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 WDR74Q6RFH5 385 aaPredicted RBP12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 TMEM183AQ8IXX5 376 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 EDDM3BP56851 147 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 HERPUD1Q15011 391 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 ADPRHL1Q8NDY3 354 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 OR52M1Q8NGK5 317 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 ANAPC16Q96DE5 110 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 GNG12Q9UBI6 72 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 AQP7P3A6NL99 342 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 DHRS7CA6NNS2 312 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 NXPH2O95156 264 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 CD5P06127 495 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 PNLIPP16233 465 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 ZNF32P17041 273 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 LTBRP36941 435 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 CARFQ8N187 725 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 C14orf144Q96I85 54 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
RPRD1A-202ENST00000399022 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 CCL3P10147 92 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 HIKESHIQ53FT3 197 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 TP53RKQ96S44 253 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 HSPB9Q9BQS6 159 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 LIN7CQ9NUP9 197 aaKnown RBP12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 PAGE4O60829 102 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 FCGR3AP08637 254 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 MDH2P40926 338 aaKnown RBP12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 STARD6P59095 220 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 CXorf66Q5JRM2 361 aaPredicted RBP12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 OR2V1Q8NHB1 315 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 MAFAQ8NHW3 353 aaPredicted RBP12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 ADIPOR1Q96A54 375 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 SYNGR2O43760 224 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 ZNF253O75346 499 aa12.72□□□□□ -0.37
RPRD1A-202ENST00000399022 PITX3O75364 302 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms