RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 J3QRK9 145 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 SLC33A1O00400 549 aaPredicted RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 CYB5AP00167 134 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 ISG15P05161 165 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 CSN2P05814 226 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 UBCP0CG48 685 aaKnown RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 CEACAM3P40198 252 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 MYCNOSP40205 109 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 PPP5CP53041 499 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 LSM3P62310 102 aaKnown RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 ZNF45Q02386 682 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 SCN1BQ07699 218 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 ST3GAL4Q11206 333 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 RAB40BQ12829 278 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 KRBOX4Q5JUW0 171 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 TMEM244Q5VVB8 128 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 FDX2Q6P4F2 183 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 LHFPL2Q6ZUX7 228 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 OR2W3Q7Z3T1 314 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 C5orf56Q8N8D9 126 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 OR4D6Q8NGJ1 314 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 OR52I1Q8NGK6 324 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 OR10AC1Q8NH08 325 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 OR9G1Q8NH87 305 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 SPSB1Q96BD6 273 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 KIRREL1Q96J84 757 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 OPALINQ96PE5 141 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 ZNF649Q9BS31 505 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 JAM3Q9BX67 310 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 PPIL3Q9H2H8 161 aaKnown RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 FGF20Q9NP95 211 aaPredicted RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 ING3Q9NXR8 418 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 CCDC59Q9P031 241 aaKnown RBP9.5□□□□□ -0.89
TFF3-202ENST00000398431 LINC00527Q9UJ94 153 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 GNG8Q9UK08 70 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 MOB4Q9Y3A3 225 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 PEX16Q9Y5Y5 336 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 KBTBD11-OT1A0A1B0GTJ5 212 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 J3QR06 171 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 IGHV3-7P01780 117 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 FAM106CPP0CH98 169 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 ZNF44P15621 663 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 NFYBP25208 207 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 MNDAP41218 407 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 PTGFRP43088 359 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 BCAP31P51572 246 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 ARHGDIBP52566 201 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 RBM39Q14498 530 aaKnown RBP9.49□□□□□ -0.89
TFF3-202ENST00000398431 CCDC144NLQ6NUI1 221 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 DRAM1Q8N682 238 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 OR51D1Q8NGF3 324 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 OR51A4Q8NGJ6 313 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 OR5D18Q8NGL1 313 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 LEAP2Q969E1 77 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 MCRIP2Q9BUT9 160 aaKnown RBP9.49□□□□□ -0.89
TFF3-202ENST00000398431 GPR61Q9BZJ8 451 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 LINC00574Q9H8X3 128 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 ZFP57Q9NU63 452 aa9.49□□□□□ -0.89
TFF3-202ENST00000398431 CHCHD3Q9NX63 227 aaKnown RBP9.49□□□□□ -0.89
TFF3-202ENST00000398431 LSM4Q9Y4Z0 139 aaKnown RBP9.49□□□□□ -0.89
TFF3-202ENST00000398431 NPIPB11E5RHQ5 1161 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 CCRL2O00421 344 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 DEGS1O15121 323 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 IGHG2P01859 326 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 ATP6V1E1P36543 226 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 DEFA1P59665 94 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 DEFA3P59666 94 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 ZP1P60852 638 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 NCS1P62166 190 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 EBI3Q14213 229 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 HNF4GQ14541 408 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 IRF3Q14653 427 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 ATXN7L3Q14CW9 347 aaPredicted RBP9.48□□□□□ -0.89
TFF3-202ENST00000398431 KLHL22Q53GT1 634 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 RNLSQ5VYX0 342 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 SAXO1Q8IYX7 474 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 CHST4Q8NCG5 386 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 OR51T1Q8NGJ9 327 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 OR13A1Q8NGR1 328 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 OR56B4Q8NH76 319 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 DPF1Q92782 380 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 TMEM80Q96HE8 168 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 MND1Q9BWT6 205 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 NCOR1P1Q9H4R4 102 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 RHOFQ9HBH0 211 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 DIMT1Q9UNQ2 313 aaKnown RBP9.48□□□□□ -0.89
TFF3-202ENST00000398431 PSG11Q9UQ72 335 aa9.48□□□□□ -0.89
TFF3-202ENST00000398431 TRAV24A0A0B4J272 114 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 OR4C45A6NMZ5 311 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 MAGEB3O15480 346 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 FGF16O43320 207 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 LIMS3P0CW19 117 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 LIMS4P0CW20 117 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 HSMCR30P0CW71 290 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 ZNF20P17024 532 aa9.47□□□□□ -0.89
TFF3-202ENST00000398431 GADD45AP24522 165 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms