RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 HSBP1O75506 76 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 CTF1Q16619 201 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 OR5A2Q8NGI9 324 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 GUCD1Q96NT3 240 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 SF3B6Q9Y3B4 125 aaKnown RBP9.89□□□□□ -0.83
TTC28-201ENST00000397906 COX6A1P12074 109 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 OR1L1Q8NH94 360 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 METTL1Q9UBP6 276 aaKnown RBP9.89□□□□□ -0.83
TTC28-201ENST00000397906 TIAF1O95411 115 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 FGF5P12034 268 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 ST3GAL2Q16842 350 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 ADAT3Q96EY9 351 aaPredicted RBP9.89□□□□□ -0.83
TTC28-201ENST00000397906 ZNF385DQ9H6B1 395 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 TRIM77I1YAP6 450 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 RHBDL1O75783 438 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 CPN1P15169 458 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 RPL7P18124 248 aaKnown RBP9.89□□□□□ -0.83
TTC28-201ENST00000397906 AHRRA9YTQ3 701 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 K7N7A8 449 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 FAM106CPP0CH98 169 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 TCL1AP56279 114 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 C5orf17Q8NAS9 161 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 TMSB15BA0A087X1C1 80 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 MTFP1Q9UDX5 166 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 ZNF137PP52743 207 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 C16orf82Q7Z2V1 217 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 ZBTB44Q8NCP5 570 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 SCNM1Q9BWG6 230 aa9.89□□□□□ -0.83
TTC28-201ENST00000397906 RBBP6Q7Z6E9 1792 aaKnown RBP9.89□□□□□ -0.83
TTC28-201ENST00000397906 ATP6V1G2-DDX39BF2Z307 99 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 HLA-DRB3P79483 266 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 ZNF552Q9H707 407 aaPredicted RBP9.88□□□□□ -0.83
TTC28-201ENST00000397906 NHLH1Q02575 133 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 NHLH2Q02577 135 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 ZNF764Q96H86 408 aaPredicted RBP9.88□□□□□ -0.83
TTC28-201ENST00000397906 SOSTQ9BQB4 213 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 RNF115Q9Y4L5 304 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 ROM1Q03395 351 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 TAF1LQ8IZX4 1826 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 OR5AL1P0C617 328 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 NQO2P16083 231 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 CSRP2Q16527 193 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 SLC26A10Q8NG04 563 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 ZNF596Q8TC21 504 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 OR2W1Q9Y3N9 320 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 PPYP01298 95 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 FAM78BQ5VT40 261 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 BMPR1BO00238 502 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 CHST1O43916 411 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 C1QCP02747 245 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 HOXD4P09016 255 aaPredicted RBP9.88□□□□□ -0.83
TTC28-201ENST00000397906 XAF1Q6GPH4 301 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 HS3ST3B1Q9Y662 390 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 ARF6P62330 175 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 RRN3P1Q2M238 152 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 TMEM204Q9BSN7 226 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 DPH3Q96FX2 82 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 ABHD17AQ96GS6 310 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 NPAS1Q99742 590 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 RPS4Y1P22090 263 aaKnown RBP9.88□□□□□ -0.83
TTC28-201ENST00000397906 CD1BP29016 333 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 P2RY6Q15077 328 aa9.88□□□□□ -0.83
TTC28-201ENST00000397906 SLC35E4Q6ICL7 350 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 IL22RA2Q969J5 263 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 ABHD14BQ96IU4 210 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 PLXNA1Q9UIW2 1896 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 J3QR06 171 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 CD300LDQ6UXZ3 194 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 SHISA5Q8N114 240 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 ANGPTL4Q9BY76 406 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 PRNDQ9UKY0 176 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 CST4P01036 141 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 SLC25A53Q5H9E4 307 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 FOXB2Q5VYV0 432 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 AKIP1Q9NQ31 210 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 TMEM140Q9NV12 185 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 LPAR3Q9UBY5 353 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 KLHDC2Q9Y2U9 406 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 SYNGR2O43760 224 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 FDX2Q6P4F2 183 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 TMEM37Q8WXS4 190 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 LEAP2Q969E1 77 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 CHST5Q9GZS9 411 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 TRAV8-7A0A075B6U6 113 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 GUK1Q16774 197 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 RAB29O14966 203 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 NUBP1P53384 320 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 LY6DQ14210 128 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 ACSF3Q4G176 576 aaPredicted RBP9.87□□□□□ -0.83
TTC28-201ENST00000397906 MMP24Q9Y5R2 645 aa9.87□□□□□ -0.83
TTC28-201ENST00000397906 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 FCN1O00602 326 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 C10orf111Q8N326 155 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms