RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 DPAGT1Q9H3H5 408 aa11.91□□□□□ -0.5
SEC13-208ENST00000397109 A0A0B4J203 849 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 FAM240BA0A1B0GVZ2 78 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 NAP1L6A6NFF2 107 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 SULT1C2O00338 296 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 SH2D1BO14796 132 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 KDM4BO94953 1096 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 TRAPPC2P0DI81 140 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 TRAPPC2BP0DI82 140 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
SEC13-208ENST00000397109 EDDM3BP56851 147 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 ERVFRD-1P60508 538 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
SEC13-208ENST00000397109 MEF2CQ06413 473 aaPredicted RBP11.9□□□□□ -0.5
SEC13-208ENST00000397109 TMEM69Q5SWH9 247 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 RAB12Q6IQ22 244 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 RNF144BQ7Z419 303 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 OR51D1Q8NGF3 324 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 FCAMRQ8WWV6 532 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 NEURL2Q9BR09 285 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 TAS2R8Q9NYW2 309 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 GHRLQ9UBU3 117 aa11.9□□□□□ -0.5
SEC13-208ENST00000397109 RBMX2Q9Y388 322 aaKnown RBP11.9□□□□□ -0.5
SEC13-208ENST00000397109 MEIOCA2RUB1 952 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 METTL21EPA6NDL7 271 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 LDLRAD4O15165 306 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 BPNT1O95861 308 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 RBP4P02753 201 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 TMEM225BP0DP42 221 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 GABRR1P24046 479 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 SLC6A1P30531 599 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 SAA4P35542 130 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 DLX1P56177 255 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 CLDN12P56749 244 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 PRB3Q04118 309 aaPredicted RBP11.89□□□□□ -0.51
SEC13-208ENST00000397109 MIDNQ504T8 468 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 ASCL4Q6XD76 172 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 C17orf107Q6ZR85 190 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 OR5D18Q8NGL1 313 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 MARVELD1Q9BSK0 173 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 ETAA1Q9NY74 926 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 RAB22AQ9UL26 194 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
SEC13-208ENST00000397109 DSCAML1Q8TD84 2053 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 TENM1Q9UKZ4 2725 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 IGKV1-12A0A0C4DH73 117 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 A0A1W2PRD5 423 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 A0A1W2PRF3 423 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 A0A1W2PRM7 423 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 hADV38S2A0JD32 116 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 TMEM82A0PJX8 343 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 MGST3O14880 152 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 IGKV1D-12P01611 117 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 HNRNPCP07910 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
SEC13-208ENST00000397109 UBBP0CG47 229 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 ZNF728P0DKX0 622 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 SPNP16150 400 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 CCL3L1P16619 93 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 CDK2P24941 298 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 DUSP1P28562 367 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 IER3P46695 156 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 RAG2P55895 527 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 ZNF273Q14593 569 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 GRK1Q15835 563 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 C11orf42Q8N5U0 333 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 DYRK2Q92630 601 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 CREB3L1Q96BA8 519 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 GPER1Q99527 375 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 ZNRD1Q9P1U0 126 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 IL36RNQ9UBH0 155 aa11.89□□□□□ -0.51
SEC13-208ENST00000397109 A0A1B0GUS0 222 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 C17orf98A8MV24 154 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 IGHV4-59P01825 116 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 LMO1P25800 156 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 ERP29P30040 261 aaKnown RBP11.88□□□□□ -0.51
SEC13-208ENST00000397109 PTGFRP43088 359 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 TAS2R20P59543 309 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 HCP5Q6MZN7 132 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 JAGN1Q8N5M9 183 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 Q8NFD4 153 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 SCPEP1Q9HB40 452 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 IL36GQ9NZH8 169 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 ZNF107Q9UII5 783 aaPredicted RBP11.88□□□□□ -0.51
SEC13-208ENST00000397109 LINC00312Q9Y6C7 94 aa11.88□□□□□ -0.51
SEC13-208ENST00000397109 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 ORC5O43913 435 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 PSPNO60542 156 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 HLA-DMAP28067 261 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 SNU13P55769 128 aaKnown RBP11.87□□□□□ -0.51
SEC13-208ENST00000397109 DLX6P56179 175 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 LGALS4P56470 323 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms